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Checking out git https://github.com/adamantine-sim/adamantine into /var/jenkins_home/workspace/adamantine-nightly@script/769419fd3c5a9c81c4beafaeab26398461553595cef1aaea2775372c607f95c5 to read ci/nightly.groovy
Selected Git installation does not exist. Using Default
The recommended git tool is: NONE
using credential e7df5eb2-574e-4ec2-98aa-f2e31f069fb4
 > git rev-parse --resolve-git-dir /var/jenkins_home/workspace/adamantine-nightly@script/769419fd3c5a9c81c4beafaeab26398461553595cef1aaea2775372c607f95c5/.git # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/adamantine-sim/adamantine # timeout=10
Fetching upstream changes from https://github.com/adamantine-sim/adamantine
 > git --version # timeout=10
 > git --version # 'git version 2.47.3'
using GIT_ASKPASS to set credentials Jenkins Bruno
 > git fetch --tags --force --progress -- https://github.com/adamantine-sim/adamantine +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
Checking out Revision cec139366b1695a049db7466ef535f9f2ff6d24e (refs/remotes/origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f cec139366b1695a049db7466ef535f9f2ff6d24e # timeout=10
Commit message: "Merge pull request #514 from Rombur/fix_thermal_stress"
 > git rev-list --no-walk cec139366b1695a049db7466ef535f9f2ff6d24e # timeout=10
[Pipeline] Start of Pipeline
[Pipeline] withEnv
[Pipeline] {
[Pipeline] timeout
Timeout set to expire in 6 hr 0 min
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Test)
[Pipeline] parallel
[Pipeline] { (Branch: CPU)
[Pipeline] { (Branch: CUDA)
[Pipeline] stage
[Pipeline] { (CPU)
[Pipeline] stage
[Pipeline] { (CUDA)
[Pipeline] node
[Pipeline] node
Running on villars06 in /var/jenkins/workspace/adamantine-nightly
Running on waffle_03 in /var/jenkins/workspace/adamantine-nightly
[Pipeline] {
[Pipeline] {
[Pipeline] checkout
Selected Git installation does not exist. Using Default
The recommended git tool is: NONE
[Pipeline] checkout
using credential e7df5eb2-574e-4ec2-98aa-f2e31f069fb4
Selected Git installation does not exist. Using Default
The recommended git tool is: NONE
Fetching changes from the remote Git repository
using credential e7df5eb2-574e-4ec2-98aa-f2e31f069fb4
Fetching changes from the remote Git repository
Checking out Revision cec139366b1695a049db7466ef535f9f2ff6d24e (refs/remotes/origin/master)
Commit message: "Merge pull request #514 from Rombur/fix_thermal_stress"
[Pipeline] withEnv
[Pipeline] {
[Pipeline] isUnix
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
Checking out Revision cec139366b1695a049db7466ef535f9f2ff6d24e (refs/remotes/origin/master)
Commit message: "Merge pull request #514 from Rombur/fix_thermal_stress"
[Pipeline] withEnv
[Pipeline] {
[Pipeline] isUnix
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
+ docker inspect -f . rombur/adamantine-stack:no_gpu-latest

Error: No such object: rombur/adamantine-stack:no_gpu-latest
 > git rev-parse --resolve-git-dir /var/jenkins/workspace/adamantine-nightly/.git # timeout=10
 > git config remote.origin.url https://github.com/adamantine-sim/adamantine # timeout=10
Fetching upstream changes from https://github.com/adamantine-sim/adamantine
 > git --version # timeout=10
 > git --version # 'git version 2.43.0'
using GIT_ASKPASS to set credentials Jenkins Bruno
 > git fetch --tags --force --progress -- https://github.com/adamantine-sim/adamantine +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f cec139366b1695a049db7466ef535f9f2ff6d24e # timeout=10
[Pipeline] isUnix
[Pipeline] withEnv
[Pipeline] {
 > git rev-parse --resolve-git-dir /var/jenkins/workspace/adamantine-nightly/.git # timeout=10
 > git config remote.origin.url https://github.com/adamantine-sim/adamantine # timeout=10
Fetching upstream changes from https://github.com/adamantine-sim/adamantine
 > git --version # timeout=10
 > git --version # 'git version 2.43.0'
using GIT_ASKPASS to set credentials Jenkins Bruno
 > git fetch --tags --force --progress -- https://github.com/adamantine-sim/adamantine +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f cec139366b1695a049db7466ef535f9f2ff6d24e # timeout=10
[Pipeline] sh
+ docker inspect -f . rombur/adamantine-stack:latest
.
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] withDockerContainer
+ docker pull rombur/adamantine-stack:no_gpu-latest
waffle_03 seems to be running inside container c3e00df1f7144af5327c0036cc8bf4478bd78552ed1b82c7a130605c1dd63855
$ docker run -t -d -u 0:0 -w /var/jenkins/workspace/adamantine-nightly --volumes-from c3e00df1f7144af5327c0036cc8bf4478bd78552ed1b82c7a130605c1dd63855 -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** rombur/adamantine-stack:latest cat
no_gpu-latest: Pulling from rombur/adamantine-stack
3ee1be183cf2: Pulling fs layer
a68c034c7713: Pulling fs layer
9c6e7aeedfcb: Pulling fs layer
18ceb10bf31b: Pulling fs layer
1961297b7efe: Pulling fs layer
099ba452fa3d: Pulling fs layer
aea17b16bd8b: Pulling fs layer
39af785332aa: Pulling fs layer
933d5c4bb047: Pulling fs layer
92cf3b14fc15: Pulling fs layer
f124fcc6db97: Pulling fs layer
68186a80352e: Pulling fs layer
825dd425294d: Pulling fs layer
446ca34efb63: Pulling fs layer
e60233229ed7: Pulling fs layer
b4e688b794f2: Pulling fs layer
55ec83d4f55f: Pulling fs layer
d1fbec07a2e5: Pulling fs layer
3ee1be183cf2: Download complete
099ba452fa3d: Download complete
18ceb10bf31b: Download complete
aea17b16bd8b: Download complete
1961297b7efe: Download complete
$ docker top 3fb79fe638b6fdc712274403d5bdba59c9d7ab4a99656200bbb4334ff2c4fd8f -eo pid,comm
ERROR: The container started but didn't run the expected command. Please double check your ENTRYPOINT does execute the command passed as docker run argument, as required by official docker images (see https://github.com/docker-library/official-images#consistency for entrypoint consistency requirements).
Alternatively you can force image entrypoint to be disabled by adding option `--entrypoint=''`.
[Pipeline] {
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
+ rm -rf build
+ mkdir -p build
[Pipeline] dir
Running in /var/jenkins/workspace/adamantine-nightly/build
[Pipeline] {
[Pipeline] sh
933d5c4bb047: Download complete
92cf3b14fc15: Download complete
825dd425294d: Download complete
a68c034c7713: Download complete
-- Using the deal.II-9.6.2 installation found at /opt/dealii
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_add_test.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_initialize_cached_variables.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_invoke_autopilot.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_pickup_tests.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_query_git_information.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_setup_target.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_shell_escape_option_groups.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_target_compile_flags.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_target_link_flags.cmake
f124fcc6db97: Download complete
446ca34efb63: Download complete
e60233229ed7: Download complete
-- The CXX compiler identification is GNU 13.3.0
-- Detecting CXX compiler ABI info
55ec83d4f55f: Download complete
b4e688b794f2: Download complete
d1fbec07a2e5: Download complete
39af785332aa: Download complete
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /opt/trilinos/bin/nvcc_wrapper - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
d1fbec07a2e5: Pull complete
55ec83d4f55f: Pull complete
3ee1be183cf2: Pull complete
92cf3b14fc15: Pull complete
446ca34efb63: Pull complete
-- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.70.0") found components: chrono program_options timer unit_test_framework 
-- Build type: Debug
-- Configuring done (9.4s)
-- Generating done (2.1s)
-- Build files have been written to: /var/jenkins/workspace/adamantine-nightly/build
[Pipeline] sh
68186a80352e: Download complete
9c6e7aeedfcb: Download complete
+ make -j8
[  1%] Copying amr_test.info
[  3%] Building CXX object source/CMakeFiles/Adamantine.dir/BodyForce.cc.o
[  3%] Copying bare_plate_L_da_augmented.info
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[  4%] Copying analytical_1D_transient.py
[  4%] Copying bare_plate_L_da.info
[  4%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_bare_plate_L_da_augmented.info
[  4%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_amr_test.info
[  4%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_analytical_1D_transient.py
[  4%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_bare_plate_L_da_aug_ref_log.txt
[  4%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_bare_plate_L_da_aug_ref_data_0_1.csv
[  4%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_bare_plate_L_da_aug_ref_data_0_0.csv
[  5%] Building CXX object source/CMakeFiles/Adamantine.dir/Boundary.cc.o
[  5%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_bare_plate_L_da.info
[  5%] Building CXX object source/CMakeFiles/Adamantine.dir/CubeHeatSource.cc.o
[  6%] Copying bare_plate_L_ensemble.info
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[ 11%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_convective_bc_gold.txt
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[ 11%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_demo_316_short.info
[ 12%] Copying demo_316_short_amr.info
[ 12%] Copying demo_316_short_anisotropic.info
[ 13%] Copying demo_316_short_scan_path.txt
[ 13%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_demo_316_short_amr.info
[ 13%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_demo_316_short_anisotropic.info
[ 13%] Copying demo_316_short_scan_path_amr.txt
[ 13%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_demo_316_short_scan_path.txt
[ 14%] Copying experiment_log_test.txt
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[ 15%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_demo_316_short_scan_path_amr.txt
[ 15%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_experiment_log_test.txt
[ 15%] Copying extruded_cube.msh
[ 15%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_experimental_data_0_0.csv
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[ 17%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_extruded_cube.msh
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[ 18%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_five_axis_scan_path.txt
[ 18%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_HourGlass_AOP.info
[ 19%] Copying HourGlass_AOP_scan_path.txt
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[ 20%] Copying integration_2d.info
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[ 20%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_HourGlass_AOP_scan_path.txt
[ 20%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_integration_2d.info
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[ 21%] Copying integration_2d_units.info
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[ 22%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_integration_2d_gold.txt
[ 22%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_integration_2d_units.info
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[ 23%] Copying integration_3d_gold_1.txt
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[ 24%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_integration_3d_gold_0.txt
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[ 24%] Copying integration_3d_gold_five_axis_0.txt
[ 24%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_integration_3d_gold_five_axis.txt
[ 25%] Copying integration_3d_gold_five_axis_1.txt
[ 25%] Copying integration_3d_gold_short.txt
[ 25%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_integration_3d_gold_five_axis_0.txt
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[ 28%] Copying integration_da_add_material.info
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[ 29%] Copying integration_da_add_material_expt_log.txt
[ 29%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_integration_da_add_material.info
[ 29%] Copying integration_da_add_material_expt_pc_0_0.csv
[ 29%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_integration_da_add_material_expt_log.txt
[ 30%] Building CXX object source/CMakeFiles/Adamantine.dir/Geometry.cc.o
[ 30%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_integration_da_add_material_expt_pc_0_0.csv
[ 30%] Building CXX object source/CMakeFiles/Adamantine.dir/GoldakHeatSource.cc.o
aea17b16bd8b: Pull complete
1961297b7efe: Pull complete
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39af785332aa: Pull complete
[ 31%] Building CXX object source/CMakeFiles/Adamantine.dir/MaterialPropertyInstDev.cc.o
[ 31%] Building CXX object source/CMakeFiles/Adamantine.dir/MaterialPropertyInstHost.cc.o
[ 32%] Building CXX object source/CMakeFiles/Adamantine.dir/MechanicalOperator.cc.o
[ 33%] Building CXX object source/CMakeFiles/Adamantine.dir/MechanicalPhysics.cc.o
[ 33%] Building CXX object source/CMakeFiles/Adamantine.dir/Microstructure.cc.o
f124fcc6db97: Pull complete
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[ 34%] Building CXX object source/CMakeFiles/Adamantine.dir/PointCloud.cc.o
825dd425294d: Pull complete
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b4e688b794f2: Pull complete
a68c034c7713: Pull complete
Digest: sha256:caaad5b827b7dcec3faa87abaca261e0311d74b2d1a8d6ec065a5116705d5aa5
Status: Downloaded newer image for rombur/adamantine-stack:no_gpu-latest
docker.io/rombur/adamantine-stack:no_gpu-latest
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] withDockerContainer
villars06 seems to be running inside container 2f5d6c2779076815e651416571d65efec0a1c6c8800184fc657615a8e3eebaf1
$ docker run -t -d -u 0:0 -w /var/jenkins/workspace/adamantine-nightly --volumes-from 2f5d6c2779076815e651416571d65efec0a1c6c8800184fc657615a8e3eebaf1 -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** rombur/adamantine-stack:no_gpu-latest cat
$ docker top c517d8a10df34a789147f56c47e6699cdf0c9c1eed045a207c979ccf52aae99e -eo pid,comm
[Pipeline] {
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
+ rm -rf build
+ mkdir -p build
[Pipeline] dir
Running in /var/jenkins/workspace/adamantine-nightly/build
[Pipeline] {
[Pipeline] sh
-- Using the deal.II-9.6.2 installation found at /opt/dealii
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_add_test.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_initialize_cached_variables.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_invoke_autopilot.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_pickup_tests.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_query_git_information.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_setup_target.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_shell_escape_option_groups.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_target_compile_flags.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_target_link_flags.cmake
-- The CXX compiler identification is GNU 13.3.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.70.0") found components: chrono program_options timer unit_test_framework 
-- Found Adiak: /opt/adiak/lib/cmake/adiak
-- Found Caliper: /opt/caliper/share/cmake/caliper
-- Build type: Debug
-- Configuring done (1.4s)
[ 34%] Building CXX object source/CMakeFiles/Adamantine.dir/PostProcessor.cc.o
-- Generating done (1.2s)
-- Build files have been written to: /var/jenkins/workspace/adamantine-nightly/build
[Pipeline] sh
+ make -j8
[  2%] Copying amr_test.info
[  2%] Copying bare_plate_L_da_aug_ref_data_0_0.csv
[  2%] Copying analytical_1D_transient.py
[  4%] Copying bare_plate_L_da_augmented.info
[  4%] Copying bare_plate_L_da.info
[  4%] Building CXX object source/CMakeFiles/Adamantine.dir/BodyForce.cc.o
[  4%] Copying bare_plate_L_da_aug_ref_log.txt
[  4%] Copying bare_plate_L_da_aug_ref_data_0_1.csv
[  4%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_analytical_1D_transient.py
[  4%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_amr_test.info
[  4%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_bare_plate_L_da_aug_ref_data_0_0.csv
[  4%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_bare_plate_L_da_augmented.info
[  4%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_bare_plate_L_da_aug_ref_data_0_1.csv
[  5%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_bare_plate_L_da_aug_ref_log.txt
[  5%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_bare_plate_L_da.info
[  6%] Building CXX object source/CMakeFiles/Adamantine.dir/Boundary.cc.o
[  6%] Copying bare_plate_L_ensemble.info
[  6%] Building CXX object source/CMakeFiles/Adamantine.dir/CubeHeatSource.cc.o
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[Pipeline] sh
+ ctest -j4 -V --timeout 7200 --no-compress-output -R test_ -T Test
UpdateCTestConfiguration  from :/var/jenkins/workspace/adamantine-nightly/build/DartConfiguration.tcl
Parse Config file:/var/jenkins/workspace/adamantine-nightly/build/DartConfiguration.tcl
   Site: c517d8a10df3
   Build name: Linux-c++
Create new tag: 20261106-0558 - Experimental
UpdateCTestConfiguration  from :/var/jenkins/workspace/adamantine-nightly/build/DartConfiguration.tcl
Parse Config file:/var/jenkins/workspace/adamantine-nightly/build/DartConfiguration.tcl
Test project /var/jenkins/workspace/adamantine-nightly/build
Constructing a list of tests
Done constructing a list of tests
Updating test list for fixtures
Added 0 tests to meet fixture requirements
Checking test dependency graph...
Checking test dependency graph end
test 1
      Start  1: test_integration_da_1

1: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da"
1: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
1: Test timeout computed to be: 7200
test 2
      Start  2: test_integration_da_2

2: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da"
2: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
2: Test timeout computed to be: 7200
test 5
      Start  5: test_closest_source_point_adaptation_1

5: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_closest_source_point_adaptation"
5: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
5: Test timeout computed to be: 7200
2: Running 3 test cases...
2: Entering test module "Integration_Data_Assimilation"
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
5: Running 1 test case...
1: Running 3 test cases...
2: Running 3 test cases...
2: Entering test module "Integration_Data_Assimilation"
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
1: Entering test module "Integration_Data_Assimilation"
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
5: Entering test module "ClosestSourcePointAdaptation"
5: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 2 frame(s).
2: Starting the main time stepping loop...
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 2 frame(s).
1: Starting the main time stepping loop...
2: Rank: 1 | Old parameters for member 2: 
2: Rank: 1 | Number expt sites mapped to DOFs: 1
2: 10% completed
1: 10% completed
2: 20% completed
2: 30% completed
1: 20% completed
[ 44%] Building CXX object source/CMakeFiles/Adamantine.dir/Timer.cc.o
2: 40% completed
2: Performing data assimilation at time 0.0211...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
1: 30% completed
[ 44%] Building CXX object source/CMakeFiles/Adamantine.dir/ensemble_management.cc.o
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
1: 40% completed
1: Performing data assimilation at time 0.0211...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Updating the ensemble members...
2: Done.
2: Rank: 1 | Old parameters for member 2: 
2: Rank: 1 | Number expt sites mapped to DOFs: 1
5: 
5: *** No errors detected
5: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 27052385us
5: Leaving test module "ClosestSourcePointAdaptation"; testing time: 27052451us
5: 
 1/48 Test  #5: test_closest_source_point_adaptation_1 ...   Passed   28.35 sec
test 9
      Start  9: test_data_assimilator_1

9: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_data_assimilator"
9: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
9: Test timeout computed to be: 7200
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
9: Running 1 test case...
9: Entering test module "DataAssimilator"
9: /var/jenkins/workspace/adamantine-nightly/tests/test_data_assimilator.cc(948): Entering test case "data_assimilator"
9: Getting the perturbed innovation...
9: Applying the Kalman gain...
9: Updating the ensemble members...
9: Getting the perturbed innovation...
9: Applying the Kalman gain...
9: Updating the ensemble members...
9: /var/jenkins/workspace/adamantine-nightly/tests/test_data_assimilator.cc(948): Leaving test case "data_assimilator"; testing time: 626116us
9: Leaving test module "DataAssimilator"; testing time: 634279us
9: 
9: *** No errors detected
9: 
 2/48 Test  #9: test_data_assimilator_1 ..................   Passed    1.56 sec
test 10
      Start 10: test_experimental_data_1

10: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_experimental_data"
10: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
10: Test timeout computed to be: 7200
2: 50% completed
10: Running 6 test cases...
10: Entering test module "ExperimentaData"
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(22): Entering test case "read_experimental_data_point_cloud_from_file"
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(22): Leaving test case "read_experimental_data_point_cloud_from_file"; testing time: 88590us
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(75): Entering test case "set_vector_with_experimental_data_point_cloud"
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(75): Leaving test case "set_vector_with_experimental_data_point_cloud"; testing time: 82883us
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(138): Entering test case "read_experimental_data_ray_tracing_from_file"
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(138): Leaving test case "read_experimental_data_ray_tracing_from_file"; testing time: 70627us
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(199): Entering test case "timestamp"
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(199): Leaving test case "timestamp"; testing time: 939us
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(225): Entering test case "project_ray_data_on_mesh"
2: 60% completed
1: Updating the ensemble members...
1: Done.
2: Performing data assimilation at time 0.0316...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
1: 50% completed
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
1: 60% completed
1: Performing data assimilation at time 0.0316...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Updating the ensemble members...
2: Done.
[ 45%] Building CXX object source/CMakeFiles/Adamantine.dir/experimental_data_utils.cc.o
2: 70% completed
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
2: 80% completed
2: 90% completed
1: Updating the ensemble members...
1: Done.
2: 100% completed
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 2 frame(s).
2: Starting the main time stepping loop...
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 2 frame(s).
2: Starting the main time stepping loop...
2: 10% completed
1: 70% completed
2: 20% completed
[ 45%] Building CXX object source/CMakeFiles/Adamantine.dir/material_deposition.cc.o
2: 30% completed
2: 40% completed
2: Performing data assimilation at time 0.0211...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: 10% completed
1: 80% completed
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
[ 46%] Building CXX object source/CMakeFiles/Adamantine.dir/validate_input_database.cc.o
2: 20% completed
1: 90% completed
2: 50% completed
2: 60% completed
2: Performing data assimilation at time 0.0316...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: 30% completed
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
1: 100% completed
2: Updating the ensemble members...
2: Done.
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 2 frame(s).
2: 40% completed
1: Starting the main time stepping loop...
2: 70% completed
2: Performing data assimilation at time 0.0211...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: 80% completed
2: 90% completed
2: 100% completed
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 88202895us
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
1: 10% completed
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
1: 20% completed
2: Updating the ensemble members...
2: Done.
[ 47%] Copying integration_da_add_material_expt_ray_0_0.csv
[ 47%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_integration_da_add_material_expt_ray_0_0.csv
[ 47%] Copying integration_da_add_material_sp.txt
[ 47%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_integration_da_add_material_sp.txt
[ 48%] Copying material_deposition_2d.txt
[ 49%] Copying material_deposition_3d.txt
[ 49%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_material_deposition_2d.txt
[ 49%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_material_deposition_3d.txt
[ 49%] Copying material_path_test_material_deposition.txt
[ 50%] Copying material_property_polynomial.info
[ 50%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_material_path_test_material_deposition.txt
[ 50%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_material_property_polynomial.info
[ 50%] Copying material_property_table.info
[ 51%] Copying microstructure_G_R_gold_1.txt
[ 51%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_material_property_table.info
[ 51%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_microstructure_G_R_gold_1.txt
[ 52%] Copying microstructure_G_R_gold_2.txt
[ 52%] Copying rays_cam-0-0_test_full.csv
[ 52%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_microstructure_G_R_gold_2.txt
[ 53%] Copying raytracing_experimental_data_0_0.csv
[ 53%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_raytracing_experimental_data_0_0.csv
[ 53%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_rays_cam-0-0_test_full.csv
[ 53%] Copying raytracing_non_AA_cells-0-0.csv
[ 54%] Copying scan_path.txt
[ 54%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_raytracing_non_AA_cells-0-0.csv
[ 54%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_scan_path.txt
[ 54%] Copying scan_path_5_axis.txt
[ 55%] Copying scan_path_arcs.txt
[ 55%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_scan_path_5_axis.txt
[ 55%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_scan_path_arcs.txt
[ 55%] Copying scan_path_diagonal.txt
[ 56%] Copying scan_path_event_series.inp
[ 56%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_scan_path_diagonal.txt
[ 56%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_scan_path_event_series.inp
[ 57%] Copying scan_path_L.txt
[ 57%] Copying scan_path_layers.txt
[ 57%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_scan_path_L.txt
[ 57%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_scan_path_layers.txt
[ 58%] Copying scan_path_test_thermal_physics.txt
[ 59%] Copying scan_path_units.txt
[ 59%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_scan_path_test_thermal_physics.txt
[ 59%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_scan_path_units.txt
[ 59%] Copying Simple_3D_ring.stl
[ 59%] Copying thermoelastic_bare_plate.info
[ 59%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_Simple_3D_ring.stl
[ 59%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_thermoelastic_bare_plate.info
[ 60%] Copying thermoelastic_bare_plate_add_material_scan_path.txt
[ 60%] Copying thermoelastic_bare_plate_scan_path.txt
[ 60%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_thermoelastic_bare_plate_add_material_scan_path.txt
[ 60%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_thermoelastic_bare_plate_scan_path.txt
[ 61%] Copying within_stl_gold.txt
[ 61%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_within_stl_gold.txt
1: 30% completed
2: 50% completed
1: 40% completed
1: Performing data assimilation at time 0.0211...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
2: 60% completed
2: Performing data assimilation at time 0.0316...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
1: Updating the ensemble members...
1: Done.
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(225): Leaving test case "project_ray_data_on_mesh"; testing time: 86476420us
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(302): Entering test case "project_ray_data_on_nonaligned_mesh"
10: 
10: *** No errors detected
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(302): Leaving test case "project_ray_data_on_nonaligned_mesh"; testing time: 93316us
10: Leaving test module "ExperimentaData"; testing time: 86814665us
10: 
 3/48 Test #10: test_experimental_data_1 .................   Passed   87.70 sec
test 11
      Start 11: test_geometry_1

11: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_geometry"
11: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
11: Test timeout computed to be: 7200
11: Running 6 test cases...
11: Entering test module "Geometry"
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(61): Entering test case "geometry_2D"
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(61): Leaving test case "geometry_2D"; testing time: 44045us
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(86): Entering test case "geometry_3D"
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(86): Leaving test case "geometry_3D"; testing time: 46149us
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(113): Entering test case "geometry_shifted_origin"
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(113): Leaving test case "geometry_shifted_origin"; testing time: 36853us
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(148): Entering test case "gmsh"
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(148): Leaving test case "gmsh"; testing time: 254559us
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(171): Entering test case "read_stl"
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(171): Leaving test case "read_stl"; testing time: 63579us
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(232): Entering test case "geometry_stl_mesh"
11: 
11: *** No errors detected
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(232): Leaving test case "geometry_stl_mesh"; testing time: 43641us
11: Leaving test module "Geometry"; testing time: 518796us
11: 
 4/48 Test #11: test_geometry_1 ..........................   Passed    1.38 sec
test 12
      Start 12: test_heat_source_1

12: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_heat_source"
12: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
12: Test timeout computed to be: 7200
12: Running 6 test cases...
12: Entering test module "HeatSource"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(104): Entering test case "gaussian_heat_source_value_2d"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(104): Leaving test case "gaussian_heat_source_value_2d"; testing time: 1190us
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(109): Entering test case "gaussian_heat_source_value_3d"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(109): Leaving test case "gaussian_heat_source_value_3d"; testing time: 189us
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(114): Entering test case "heat_source_value_2d"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(114): Leaving test case "heat_source_value_2d"; testing time: 240us
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(190): Entering test case "heat_source_vectorized_value_2d"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(190): Leaving test case "heat_source_vectorized_value_2d"; testing time: 229us
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(315): Entering test case "heat_source_value_3d"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(315): Leaving test case "heat_source_value_3d"; testing time: 248us
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(381): Entering test case "heat_source_vectorized_value_3d"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(381): Leaving test case "heat_source_vectorized_value_3d"; testing time: 227us
12: Leaving test module "HeatSource"; testing time: 4611us
12: 
12: *** No errors detected
12: 
 5/48 Test #12: test_heat_source_1 .......................   Passed    0.98 sec
test 13
      Start 13: test_integration_3d_device_1

13: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_device"
13: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
13: Test timeout computed to be: 7200
1: 50% completed
13: Running 2 test cases...
13: Entering test module "Integration_3D_Device"
13: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_device.cc(19): Entering test case "integration_3D_device"
2: Updating the ensemble members...
2: Done.
1: 60% completed
2: 70% completed
1: Performing data assimilation at time 0.0316...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
2: 80% completed
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
2: 90% completed
1: Updating the ensemble members...
1: Done.
2: 100% completed
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 142660991us
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: Starting the main time stepping loop...
2: Rank: 1 | Old parameters for member 2: 
2: Rank: 1 | Number expt sites mapped to DOFs: 1
2: 10% completed
2: 20% completed
2: 30% completed
2: 40% completed
2: 50% completed
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
1: 70% completed
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
2: 60% completed
2: 70% completed
2: 80% completed
2: 90% completed
2: 100% completed
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: Starting the main time stepping loop...
2: 10% completed
2: 20% completed
2: 30% completed
2: 40% completed
2: 50% completed
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
2: 60% completed
2: Reading the experimental log file...
2: 70% completed
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: 80% completed
2: 90% completed
2: Starting the main time stepping loop...
2: 100% completed
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 59943440us
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
2: 10% completed
2: 20% completed
1: 80% completed
2: 30% completed
2: 40% completed
2: 50% completed
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
2: 60% completed
2: 70% completed
2: 80% completed
2: 90% completed
2: 100% completed
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 10338579us
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
1: 90% completed
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: Starting the main time stepping loop...
2: Rank: 1 | Old parameters for member 2: 
2: Rank: 1 | Number expt sites mapped to DOFs: 1
2: 10% completed
2: 20% completed
2: 30% completed
2: 40% completed
2: 50% completed
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
2: 60% completed
2: 70% completed
2: 80% completed
2: 90% completed
2: 100% completed
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: Starting the main time stepping loop...
2: 10% completed
2: 20% completed
2: 30% completed
2: 40% completed
2: 50% completed
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
2: 60% completed
2: 70% completed
2: 80% completed
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: 90% completed
2: Starting the main time stepping loop...
2: 100% completed
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 10566942us
2: Leaving test module "Integration_Data_Assimilation"; testing time: 158713421us
2: 
2: *** No errors detected
1: 100% completed
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 159307544us
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
2: 10% completed
2: 20% completed
2: 30% completed
2: 40% completed
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: 50% completed
1: Starting the main time stepping loop...
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
1: 10% completed
2: Updating the ensemble members...
2: Done.
2: 60% completed
1: 20% completed
2: 70% completed
1: 30% completed
2: 80% completed
1: 40% completed
2: 90% completed
1: 50% completed
1: Performing data assimilation at time 0.12...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
1: Updating the ensemble members...
1: Done.
1: 60% completed
2: 100% completed
1: 70% completed
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 9597579us
2: Leaving test module "Integration_Data_Assimilation"; testing time: 162614654us
2: 
2: *** No errors detected
2: 
 6/48 Test  #2: test_integration_da_2 ....................   Passed  163.91 sec
test 6
      Start  6: test_closest_source_point_adaptation_2

6: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_closest_source_point_adaptation"
6: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
6: Test timeout computed to be: 7200
1: 80% completed
1: 90% completed
6: Running 1 test case...
6: Running 1 test case...
6: Entering test module "ClosestSourcePointAdaptation"
6: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
6: Entering test module "ClosestSourcePointAdaptation"
6: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
1: 100% completed
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 1 frame(s).
1: Starting the main time stepping loop...
1: 10% completed
1: 20% completed
1: 30% completed
1: 40% completed
1: 50% completed
1: Performing data assimilation at time 0.12...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
1: Updating the ensemble members...
1: Done.
1: 60% completed
1: 70% completed
1: 80% completed
1: 90% completed
1: 100% completed
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 11229562us
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 1 frame(s).
1: Starting the main time stepping loop...
1: 10% completed
1: 20% completed
1: 30% completed
1: 40% completed
1: 50% completed
1: Performing data assimilation at time 0.12...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
1: Updating the ensemble members...
1: Done.
1: 60% completed
1: 70% completed
1: 80% completed
1: 90% completed
1: 100% completed
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 1 frame(s).
1: Starting the main time stepping loop...
1: 10% completed
1: 20% completed
6: 
6: *** No errors detected
6: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 15766570us
6: Leaving test module "ClosestSourcePointAdaptation"; testing time: 15766664us
6: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 15781242us
6: 
6: *** No errors detected
6: Leaving test module "ClosestSourcePointAdaptation"; testing time: 15790884us
1: 30% completed
6: 
 7/48 Test  #6: test_closest_source_point_adaptation_2 ...   Passed   16.57 sec
test 14
      Start 14: test_material_property_1

14: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_material_property"
14: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
14: Test timeout computed to be: 7200
test 15
      Start 15: test_material_property_device_1

15: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_material_property_device"
15: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
15: Test timeout computed to be: 7200
1: 40% completed
1: 50% completed
1: Performing data assimilation at time 0.12...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
14: Running 4 test cases...
14: Entering test module "MaterialProperty"
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(13): Entering test case "material_property_host"
15: Running 4 test cases...
15: Entering test module "MaterialPropertyDevice"
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(13): Entering test case "material_property_device"
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(13): Leaving test case "material_property_host"; testing time: 90703us
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(18): Entering test case "ratios_host"
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(13): Leaving test case "material_property_device"; testing time: 91567us
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(18): Entering test case "ratios_device"
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(18): Leaving test case "ratios_device"; testing time: 70832us
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(20): Entering test case "material_property_table_device"
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(18): Leaving test case "ratios_host"; testing time: 80563us
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(20): Entering test case "material_property_table_host"
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(20): Leaving test case "material_property_table_host"; testing time: 52253us
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(25): Entering test case "material_property_polynomials_host"
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(20): Leaving test case "material_property_table_device"; testing time: 61669us
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(25): Entering test case "material_property_polynomials_device"
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(25): Leaving test case "material_property_polynomials_host"; testing time: 59946us
14: Leaving test module "MaterialProperty"; testing time: 283677us
14: 
14: *** No errors detected
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(25): Leaving test case "material_property_polynomials_device"; testing time: 66938us
15: Leaving test module "MaterialPropertyDevice"; testing time: 291206us
15: 
15: *** No errors detected
15: 
 8/48 Test #15: test_material_property_device_1 ..........   Passed    1.21 sec
test 16
      Start 16: test_mechanical_operator_1

16: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_mechanical_operator"
16: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
16: Test timeout computed to be: 7200
14: 
 9/48 Test #14: test_material_property_1 .................   Passed    1.23 sec
test 17
      Start 17: test_mechanical_physics_1

17: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_mechanical_physics"
17: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
17: Test timeout computed to be: 7200
1: Updating the ensemble members...
1: Done.
1: 60% completed
1: 70% completed
1: 80% completed
17: Running 8 test cases...
17: Entering test module "MechanicalPhysics"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(197): Entering test case "elastostatic"
16: Running 3 test cases...
16: Entering test module "MechanicalOperator"
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(72): Entering test case "elastostatic"
1: 90% completed
1: 100% completed
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 12459594us
1: Leaving test module "Integration_Data_Assimilation"; testing time: 182996896us
1: 
1: *** No errors detected
1: 
10/48 Test  #1: test_integration_da_1 ....................   Passed  184.31 sec
test 18
      Start 18: test_post_processor_1

18: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_post_processor"
18: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
18: Test timeout computed to be: 7200
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(197): Leaving test case "elastostatic"; testing time: 1800237us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(275): Entering test case "elastoplastic_residual"
18: Running 2 test cases...
18: Entering test module "PostProcessor"
18: /var/jenkins/workspace/adamantine-nightly/tests/test_post_processor.cc(27): Entering test case "thermal_post_processor"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(275): Leaving test case "elastoplastic_residual"; testing time: 1107617us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(396): Entering test case "fe_nothing"
18: /var/jenkins/workspace/adamantine-nightly/tests/test_post_processor.cc(27): Leaving test case "thermal_post_processor"; testing time: 349810us
18: /var/jenkins/workspace/adamantine-nightly/tests/test_post_processor.cc(149): Entering test case "mechanical_post_processor"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(396): Leaving test case "fe_nothing"; testing time: 1887988us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(663): Entering test case "thermoelastic_eshelby"
18: /var/jenkins/workspace/adamantine-nightly/tests/test_post_processor.cc(149): Leaving test case "mechanical_post_processor"; testing time: 10438786us
18: Leaving test module "PostProcessor"; testing time: 10788696us
18: 
18: *** No errors detected
18: 
11/48 Test #18: test_post_processor_1 ....................   Passed   11.76 sec
test 19
      Start 19: test_quaternion_1

19: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_quaternion"
19: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
19: Test timeout computed to be: 7200
19: Running 1 test case...
19: Entering test module "Quaternion"
19: /var/jenkins/workspace/adamantine-nightly/tests/test_quaternion.cc(11): Entering test case "rotation"
19: /var/jenkins/workspace/adamantine-nightly/tests/test_quaternion.cc(11): Leaving test case "rotation"; testing time: 186us
19: Leaving test module "Quaternion"; testing time: 214us
19: 
19: *** No errors detected
19: 
12/48 Test #19: test_quaternion_1 ........................   Passed    1.08 sec
test 20
      Start 20: test_scan_path_1

20: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_scan_path"
20: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
20: Test timeout computed to be: 7200
20: Running 3 test cases...
20: Entering test module "ScanPath"
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(36): Entering test case "scan_path"
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(36): Leaving test case "scan_path"; testing time: 1005us
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(78): Entering test case "scan_path_location"
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(78): Leaving test case "scan_path_location"; testing time: 133us
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(106): Entering test case "five_axis"
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(106): Leaving test case "five_axis"; testing time: 840us
20: Leaving test module "ScanPath"; testing time: 2581us
20: 
20: *** No errors detected
20: 
13/48 Test #20: test_scan_path_1 .........................   Passed    1.14 sec
test 21
      Start 21: test_thermal_operator_1

21: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_operator"
21: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
21: Test timeout computed to be: 7200
21: Running 6 test cases...
21: Entering test module "ThermalOperator"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(41): Entering test case "thermal_operator"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(41): Leaving test case "thermal_operator"; testing time: 265122us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(148): Entering test case "spmv"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(148): Leaving test case "spmv"; testing time: 403696us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(265): Entering test case "spmv_anisotropic"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(265): Leaving test case "spmv_anisotropic"; testing time: 406982us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(415): Entering test case "spmv_anisotropic_angle"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(415): Leaving test case "spmv_anisotropic_angle"; testing time: 1836352us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(580): Entering test case "spmv_rad"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(580): Leaving test case "spmv_rad"; testing time: 4539801us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(772): Entering test case "spmv_conv"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(772): Leaving test case "spmv_conv"; testing time: 6023201us
21: Leaving test module "ThermalOperator"; testing time: 13511562us
21: 
21: *** No errors detected
21: 
14/48 Test #21: test_thermal_operator_1 ..................   Passed   14.61 sec
test 22
      Start 22: test_thermal_operator_device_1

22: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_operator_device"
22: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
22: Test timeout computed to be: 7200
22: Running 4 test cases...
22: Entering test module "ThermalOperatorDevice"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(31): Entering test case "thermal_operator_dev"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(31): Leaving test case "thermal_operator_dev"; testing time: 159655us
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(124): Entering test case "spmv"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(124): Leaving test case "spmv"; testing time: 369527us
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(237): Entering test case "mf_spmv"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(237): Leaving test case "mf_spmv"; testing time: 3068178us
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(375): Entering test case "spmv_anisotropic_angle"
22: 
22: *** No errors detected
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(375): Leaving test case "spmv_anisotropic_angle"; testing time: 2019141us
22: Leaving test module "ThermalOperatorDevice"; testing time: 5630646us
22: 
15/48 Test #22: test_thermal_operator_device_1 ...........   Passed    6.70 sec
test 23
      Start 23: test_thermal_physics_device_1

23: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_physics_device"
23: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
23: Test timeout computed to be: 7200
23: Running 4 test cases...
23: Entering test module "ThermalPhysicsDevice"
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(13): Entering test case "thermal_2d_explicit_device"
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(13): Leaving test case "thermal_2d_explicit_device"; testing time: 242918us
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(26): Entering test case "thermal_2d_manufactured_solution_device"
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(26): Leaving test case "thermal_2d_manufactured_solution_device"; testing time: 237017us
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(31): Entering test case "initial_temperature_device"
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(31): Leaving test case "initial_temperature_device"; testing time: 146075us
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(36): Entering test case "energy_conservation_device"
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(72): Leaving test case "elastostatic"; testing time: 38891894us
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(302): Entering test case "thermoelastic"
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(302): Leaving test case "thermoelastic"; testing time: 10968778us
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(393): Entering test case "jacobian"
16: 
16: *** No errors detected
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(393): Leaving test case "jacobian"; testing time: 359766us
16: Leaving test module "MechanicalOperator"; testing time: 50226809us
16: 
16/48 Test #16: test_mechanical_operator_1 ...............   Passed   51.21 sec
test 24
      Start 24: test_timer_1

24: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_timer"
24: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
24: Test timeout computed to be: 7200
24: Running 1 test case...
24: Entering test module "Timer"
24: /var/jenkins/workspace/adamantine-nightly/tests/test_timer.cc(15): Entering test case "test_timer"
24: 
24: *** No errors detected
24: /var/jenkins/workspace/adamantine-nightly/tests/test_timer.cc(15): Leaving test case "test_timer"; testing time: 600406us
24: Leaving test module "Timer"; testing time: 600489us
24: 
17/48 Test #24: test_timer_1 .............................   Passed    1.80 sec
test 25
      Start 25: test_utils_1

25: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_utils"
25: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
25: Test timeout computed to be: 7200
25: Running 1 test case...
25: Entering test module "utils"
25: /var/jenkins/workspace/adamantine-nightly/tests/test_utils.cc(11): Entering test case "utils"
25: 
25: *** No errors detected
25: /var/jenkins/workspace/adamantine-nightly/tests/test_utils.cc(11): Leaving test case "utils"; testing time: 6306us
25: Leaving test module "utils"; testing time: 6357us
25: 
18/48 Test #25: test_utils_1 .............................   Passed    1.15 sec
test 26
      Start 26: test_validate_input_database_1

26: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_validate_input_database"
26: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
26: Test timeout computed to be: 7200
26: Running 3 test cases...
26: Entering test module "validate_input_database"
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(14): Entering test case "expected_passes"
26: Test case expected_passes did not check any assertions
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(14): Leaving test case "expected_passes"; testing time: 539us
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(55): Entering test case "parse_test_input_files"
26: Test case parse_test_input_files did not check any assertions
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(55): Leaving test case "parse_test_input_files"; testing time: 4089us
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(76): Entering test case "expected_failures"
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(76): Leaving test case "expected_failures"; testing time: 4686us
26: Leaving test module "validate_input_database"; testing time: 9434us
26: 
26: *** No errors detected
26: 
19/48 Test #26: test_validate_input_database_1 ...........   Passed    1.10 sec
test 27
      Start 27: test_integration_2d_1

27: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_2d"
27: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
27: Test timeout computed to be: 7200
27: Running 3 test cases...
27: Entering test module "Integration_2D"
27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Entering test case "integration_2D"
27: 10% completed
27: 20% completed
27: 30% completed
27: 40% completed
13: 10% completed
27: 50% completed
27: 60% completed
27: 70% completed
27: 80% completed
27: 90% completed
27: 100% completed
27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Leaving test case "integration_2D"; testing time: 4379068us
27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Entering test case "integration_2D_ensemble"
27: Starting the main time stepping loop...
27: 10% completed
27: 20% completed
27: 30% completed
27: 40% completed
27: 50% completed
27: 60% completed
27: 70% completed
27: 80% completed
27: 90% completed
27: 100% completed
27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Leaving test case "integration_2D_ensemble"; testing time: 13479891us
27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Entering test case "integration_2D_units"
27: 10% completed
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27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Leaving test case "integration_2D_units"; testing time: 4471807us
27: Leaving test module "Integration_2D"; testing time: 22331751us
27: 
27: *** No errors detected
27: 
20/48 Test #27: test_integration_2d_1 ....................   Passed   23.44 sec
test 29
      Start 29: test_integration_2d_device_1

29: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_2d_device"
29: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
29: Test timeout computed to be: 7200
29: Running 1 test case...
29: Entering test module "Integration_2D_Device"
29: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Entering test case "intregation_2D_device"
29: 10% completed
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29: 
29: *** No errors detected
29: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Leaving test case "intregation_2D_device"; testing time: 8407208us
29: Leaving test module "Integration_2D_Device"; testing time: 8407537us
29: 
21/48 Test #29: test_integration_2d_device_1 .............   Passed    9.53 sec
test 31
      Start 31: test_integration_3d_1

31: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d"
31: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
31: Test timeout computed to be: 7200
31: Running 5 test cases...
31: Entering test module "Integration_3D"
31: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Entering test case "integration_3D"
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(36): Leaving test case "energy_conservation_device"; testing time: 114468174us
23: Leaving test module "ThermalPhysicsDevice"; testing time: 115111118us
23: 
23: *** No errors detected
23: 
22/48 Test #23: test_thermal_physics_device_1 ............   Passed  116.21 sec
test 33
      Start 33: test_integration_3d_amr_1

33: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_amr"
33: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
33: Test timeout computed to be: 7200
33: Running 2 test cases...
33: Entering test module "Integration_3D_AMR"
33: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Entering test case "integration_3D_amr"
33: 10% completed
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17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(663): Leaving test case "thermoelastic_eshelby"; testing time: 165865574us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(691): Entering test case "elastoplastic_radial_return"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(691): Leaving test case "elastoplastic_radial_return"; testing time: 641048us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(848): Entering test case "cell_data_transfer_refine_coarsen"
33: 80% completed
33: 90% completed
31: 10% completed
33: 100% completed
33: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Leaving test case "integration_3D_amr"; testing time: 21853621us
33: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Entering test case "integration_3D_amr_refine_coarsen"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(848): Leaving test case "cell_data_transfer_refine_coarsen"; testing time: 7343819us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(958): Entering test case "thermoelastic_stress_uniform_heating"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(958): Leaving test case "thermoelastic_stress_uniform_heating"; testing time: 921438us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(1063): Entering test case "thermoelastoplastic_radial_return"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(1063): Leaving test case "thermoelastoplastic_radial_return"; testing time: 1181794us
17: Leaving test module "MechanicalPhysics"; testing time: 180786955us
17: 
17: *** No errors detected
17: 
23/48 Test #17: test_mechanical_physics_1 ................   Passed  181.75 sec
test 35
      Start 35: test_integration_3d_amr_device_1

35: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_amr_device"
35: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
35: Test timeout computed to be: 7200
35: Running 1 test case...
35: Entering test module "Integration_3D_AMR"
35: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Entering test case "integration_3D_amr_device"
13: 20% completed
[ 61%] Built target Adamantine
[ 62%] Building CXX object tests/CMakeFiles/test_integration_da.dir/test_integration_da.cc.o
[ 63%] Building CXX object applications/CMakeFiles/adamantine.dir/adamantine.cc.o
[ 64%] Building CXX object tests/CMakeFiles/test_data_assimilator.dir/test_data_assimilator.cc.o
[ 64%] Building CXX object applications/CMakeFiles/activation_visualizer.dir/activation_visualizer.cc.o
[ 64%] Building CXX object tests/CMakeFiles/test_experimental_data.dir/test_experimental_data.cc.o
[ 65%] Building CXX object tests/CMakeFiles/test_closest_source_point_adaptation.dir/test_closest_source_point_adaptation.cc.o
[ 67%] Building CXX object tests/CMakeFiles/test_geometry.dir/test_geometry.cc.o
[ 67%] Building CXX object tests/CMakeFiles/test_heat_source.dir/test_heat_source.cc.o
35: 10% completed
31: 20% completed
[ 67%] Linking CXX executable ../bin/test_heat_source
33: 10% completed
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[ 67%] Built target test_heat_source
[ 68%] Building CXX object tests/CMakeFiles/test_integration_3d_device.dir/test_integration_3d_device.cc.o
[ 69%] Linking CXX executable ../bin/test_experimental_data
[ 69%] Linking CXX executable ../bin/test_closest_source_point_adaptation
31: 40% completed
35: 20% completed
[ 70%] Linking CXX executable ../bin/activation_visualizer
[ 71%] Linking CXX executable ../bin/test_data_assimilator
[ 71%] Built target test_experimental_data
[ 72%] Building CXX object tests/CMakeFiles/test_material_property.dir/test_material_property.cc.o
[ 72%] Built target test_closest_source_point_adaptation
[ 73%] Building CXX object tests/CMakeFiles/test_material_property_device.dir/test_material_property_device.cc.o
[ 73%] Linking CXX executable ../bin/test_geometry
33: 20% completed
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[ 74%] Building CXX object tests/CMakeFiles/test_mechanical_operator.dir/test_mechanical_operator.cc.o
[ 74%] Built target test_data_assimilator
[ 75%] Building CXX object tests/CMakeFiles/test_mechanical_physics.dir/test_mechanical_physics.cc.o
[ 75%] Linking CXX executable ../bin/test_integration_da
35: 30% completed
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[ 75%] Building CXX object tests/CMakeFiles/test_post_processor.dir/test_post_processor.cc.o
[ 75%] Built target test_integration_da
[ 76%] Building CXX object tests/CMakeFiles/test_quaternion.dir/test_quaternion.cc.o
33: 30% completed
31: 60% completed
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[ 76%] Linking CXX executable ../bin/test_material_property
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[ 76%] Linking CXX executable ../bin/test_quaternion
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[ 77%] Building CXX object tests/CMakeFiles/test_scan_path.dir/test_scan_path.cc.o
[ 77%] Built target test_material_property
[ 78%] Building CXX object tests/CMakeFiles/test_thermal_operator.dir/test_thermal_operator.cc.o
[ 78%] Built target test_integration_3d_device
[ 79%] Building CXX object tests/CMakeFiles/test_thermal_operator_device.dir/test_thermal_operator_device.cc.o
[ 79%] Built target test_quaternion
[ 79%] Building CXX object tests/CMakeFiles/test_thermal_physics_device.dir/test_thermal_physics_device.cc.o
[ 79%] Linking CXX executable ../bin/test_mechanical_operator
33: 40% completed
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[ 81%] Linking CXX executable ../bin/test_post_processor
[ 81%] Linking CXX executable ../bin/test_scan_path
[ 81%] Built target test_mechanical_operator
[ 82%] Building CXX object tests/CMakeFiles/test_timer.dir/test_timer.cc.o
[ 82%] Built target test_mechanical_physics
[ 83%] Building CXX object tests/CMakeFiles/test_utils.dir/test_utils.cc.o
35: 50% completed
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[ 84%] Building CXX object tests/CMakeFiles/test_validate_input_database.dir/test_validate_input_database.cc.o
31: 80% completed
[ 84%] Built target test_post_processor
[ 85%] Building CXX object tests/CMakeFiles/test_integration_2d.dir/test_integration_2d.cc.o
[ 85%] Linking CXX executable ../bin/test_timer
31: 90% completed
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[ 86%] Linking CXX executable ../bin/test_utils
33: 50% completed
[ 87%] Linking CXX executable ../bin/test_thermal_operator_device
[ 88%] Linking CXX executable ../bin/test_validate_input_database
[ 88%] Linking CXX executable ../bin/test_thermal_operator
[ 88%] Built target test_timer
[ 89%] Building CXX object tests/CMakeFiles/test_integration_2d_device.dir/test_integration_2d_device.cc.o
31: 100% completed
31: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Leaving test case "integration_3D"; testing time: 309480336us
31: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Entering test case "integration_3D_short"
35: 60% completed
[ 89%] Built target test_thermal_physics_device
[ 89%] Built target test_utils
[ 89%] Building CXX object tests/CMakeFiles/test_integration_3d.dir/test_integration_3d.cc.o
[ 89%] Building CXX object tests/CMakeFiles/test_integration_3d_amr.dir/test_integration_3d_amr.cc.o
[ 89%] Built target test_validate_input_database
[ 89%] Built target test_thermal_operator_device
[ 89%] Built target test_thermal_operator
[ 90%] Building CXX object tests/CMakeFiles/test_integration_3d_amr_device.dir/test_integration_3d_amr_device.cc.o
[ 91%] Building CXX object tests/CMakeFiles/test_integration_da_augmented.dir/test_integration_da_augmented.cc.o
[ 91%] Building CXX object tests/CMakeFiles/test_integration_thermoelastic.dir/test_integration_thermoelastic.cc.o
33: 60% completed
35: 70% completed
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[ 91%] Linking CXX executable ../bin/test_integration_2d
33: 80% completed
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[ 91%] Built target test_integration_2d
[ 91%] Building CXX object tests/CMakeFiles/test_material_deposition.dir/test_material_deposition.cc.o
[ 92%] Linking CXX executable ../bin/test_integration_2d_device
[ 93%] Linking CXX executable ../bin/test_integration_3d_amr
[ 94%] Linking CXX executable ../bin/test_integration_3d
33: 100% completed
33: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Leaving test case "integration_3D_amr_refine_coarsen"; testing time: 307655683us
33: 
33: Leaving test module "Integration_3D_AMR"; testing time: 329516975us
33: *** No errors detected
33: 
24/48 Test #33: test_integration_3d_amr_1 ................   Passed  330.61 sec
test 37
      Start 37: test_integration_da_augmented_1

37: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da_augmented"
37: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
37: Test timeout computed to be: 7200
37: Running 1 test case...
37: Entering test module "Integration_Data_Assimilation_Augmented"
37: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Entering test case "integration_3D_data_assimilation_augmented"
35: 80% completed
37: Reading the experimental log file...
37: Done. Log entries found for 1 camera(s), with 2 frame(s).
37: Starting the main time stepping loop...
[ 95%] Linking CXX executable ../bin/test_integration_da_augmented
[ 96%] Linking CXX executable ../bin/test_integration_thermoelastic
[ 96%] Linking CXX executable ../bin/test_integration_3d_amr_device
13: 40% completed
[ 96%] Linking CXX executable ../bin/adamantine
37: 10% completed
[ 96%] Built target test_integration_2d_device
[ 96%] Building CXX object tests/CMakeFiles/test_microstructure.dir/test_microstructure.cc.o
[ 96%] Built target test_integration_3d
[ 96%] Building CXX object tests/CMakeFiles/test_thermal_physics.dir/test_thermal_physics.cc.o
[ 96%] Built target test_integration_3d_amr
[ 96%] Building CXX object tests/CMakeFiles/test_ensemble_management.dir/test_ensemble_management.cc.o
37: 20% completed
[ 96%] Built target test_integration_thermoelastic
[ 96%] Built target test_integration_da_augmented
[ 96%] Built target test_integration_3d_amr_device
37: 30% completed
[ 96%] Built target adamantine
35: 90% completed
37: 40% completed
[ 97%] Linking CXX executable ../bin/test_ensemble_management
[ 98%] Linking CXX executable ../bin/test_material_deposition
37: 50% completed
37: 60% completed
[ 98%] Built target test_ensemble_management
[ 98%] Built target test_material_deposition
[ 99%] Linking CXX executable ../bin/test_microstructure
[100%] Linking CXX executable ../bin/test_thermal_physics
35: 100% completed
35: 
35: *** No errors detected
35: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Leaving test case "integration_3D_amr_device"; testing time: 369520559us
35: Leaving test module "Integration_3D_AMR"; testing time: 369521235us
35: 
25/48 Test #35: test_integration_3d_amr_device_1 .........   Passed  370.61 sec
test 39
      Start 39: test_integration_thermoelastic_1

39: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic"
39: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
39: Test timeout computed to be: 7200
37: 70% completed
39: Running 2 test cases...
39: Entering test module "Integration_Thermoelastic"
39: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(19): Entering test case "integration_thermoelastic"
37: Performing data assimilation at time 0.04...
37: Rank: 0 | Old parameters for member 0: 0.413453 
37: Rank: 0 | Old parameters for member 1: 0.385362 
37: Rank: 0 | Old parameters for member 2: 0.446065 
37: Rank: 0 | Number expt sites mapped to DOFs: 2
[100%] Built target test_microstructure
[100%] Built target test_thermal_physics
[Pipeline] sh
+ ctest -j4 -V --timeout 7200 --no-compress-output -R test_ -T Test
UpdateCTestConfiguration  from :/var/jenkins/workspace/adamantine-nightly/build/DartConfiguration.tcl
Parse Config file:/var/jenkins/workspace/adamantine-nightly/build/DartConfiguration.tcl
   Site: 3fb79fe638b6
   Build name: Linux-nvcc_wrapper
Create new tag: 20261106-0610 - Experimental
UpdateCTestConfiguration  from :/var/jenkins/workspace/adamantine-nightly/build/DartConfiguration.tcl
Parse Config file:/var/jenkins/workspace/adamantine-nightly/build/DartConfiguration.tcl
Test project /var/jenkins/workspace/adamantine-nightly/build
Constructing a list of tests
Done constructing a list of tests
Updating test list for fixtures
Added 0 tests to meet fixture requirements
Checking test dependency graph...
Checking test dependency graph end
test 1
      Start  1: test_integration_da_1

1: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da"
1: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
1: Test timeout computed to be: 7200
test 2
      Start  2: test_integration_da_2

2: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da"
2: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
2: Test timeout computed to be: 7200
test 5
      Start  5: test_closest_source_point_adaptation_1

5: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_closest_source_point_adaptation"
5: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
5: Test timeout computed to be: 7200
2: Running 3 test cases...
2: Entering test module "Integration_Data_Assimilation"
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
5: Running 1 test case...
5: Entering test module "ClosestSourcePointAdaptation"
5: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
2: Running 3 test cases...
2: Entering test module "Integration_Data_Assimilation"
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
1: Running 3 test cases...
1: Entering test module "Integration_Data_Assimilation"
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
37: Getting the perturbed innovation...
37: Applying the Kalman gain...
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 2 frame(s).
2: Starting the main time stepping loop...
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 2 frame(s).
1: Starting the main time stepping loop...
37: Updating the ensemble members...
37: Done.
37: Rank: 0 | New parameters for member 0: 0.121104 
37: Rank: 0 | New parameters for member 1: 0.142225 
37: Rank: 0 | New parameters for member 2: 0.107206 
37: 80% completed
2: Rank: 1 | Old parameters for member 2: 
2: Rank: 1 | Number expt sites mapped to DOFs: 1
2: 10% completed
1: 10% completed
2: 20% completed
37: 90% completed
2: 30% completed
1: 20% completed
37: 100% completed
37: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Leaving test case "integration_3D_data_assimilation_augmented"; testing time: 107489410us
37: Leaving test module "Integration_Data_Assimilation_Augmented"; testing time: 107496824us
37: 
37: *** No errors detected
37: 
26/48 Test #37: test_integration_da_augmented_1 ..........   Passed  108.62 sec
test 41
      Start 41: test_material_deposition_1

41: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_material_deposition"
41: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
41: Test timeout computed to be: 7200
41: Running 11 test cases...
41: Entering test module "MaterialDeposition"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Entering test case "read_material_deposition_file_2d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Leaving test case "read_material_deposition_file_2d"; testing time: 1083us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Entering test case "read_material_deposition_file_3d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Leaving test case "read_material_deposition_file_3d"; testing time: 1842us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(134): Entering test case "get_elements_to_activate_2d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(134): Leaving test case "get_elements_to_activate_2d"; testing time: 117869us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(195): Entering test case "get_elements_to_activate_3d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(195): Leaving test case "get_elements_to_activate_3d"; testing time: 495127us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Entering test case "material_deposition"
2: 40% completed
2: Performing data assimilation at time 0.0211...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
1: 30% completed
5: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 33158757us
5: Leaving test module "ClosestSourcePointAdaptation"; testing time: 33158802us
5: 
5: *** No errors detected
5: 
 1/48 Test  #5: test_closest_source_point_adaptation_1 ...   Passed   36.16 sec
test 9
      Start  9: test_data_assimilator_1

9: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_data_assimilator"
9: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
9: Test timeout computed to be: 7200
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
1: 40% completed
9: Running 1 test case...
9: Entering test module "DataAssimilator"
9: /var/jenkins/workspace/adamantine-nightly/tests/test_data_assimilator.cc(948): Entering test case "data_assimilator"
2: Updating the ensemble members...
2: Done.
1: Performing data assimilation at time 0.0211...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
9: Getting the perturbed innovation...
9: Applying the Kalman gain...
9: Updating the ensemble members...
9: Getting the perturbed innovation...
9: Applying the Kalman gain...
9: Updating the ensemble members...
9: /var/jenkins/workspace/adamantine-nightly/tests/test_data_assimilator.cc(948): Leaving test case "data_assimilator"; testing time: 787216us
9: Leaving test module "DataAssimilator"; testing time: 787245us
9: 
9: *** No errors detected
9: 
 2/48 Test  #9: test_data_assimilator_1 ..................   Passed    5.32 sec
test 10
      Start 10: test_experimental_data_1

10: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_experimental_data"
10: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
10: Test timeout computed to be: 7200
2: Rank: 1 | Old parameters for member 2: 
2: Rank: 1 | Number expt sites mapped to DOFs: 1
10: Running 6 test cases...
10: Entering test module "ExperimentaData"
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(22): Entering test case "read_experimental_data_point_cloud_from_file"
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(22): Leaving test case "read_experimental_data_point_cloud_from_file"; testing time: 168298us
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(75): Entering test case "set_vector_with_experimental_data_point_cloud"
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(75): Leaving test case "set_vector_with_experimental_data_point_cloud"; testing time: 114633us
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(138): Entering test case "read_experimental_data_ray_tracing_from_file"
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(138): Leaving test case "read_experimental_data_ray_tracing_from_file"; testing time: 205217us
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(199): Entering test case "timestamp"
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(199): Leaving test case "timestamp"; testing time: 11659us
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(225): Entering test case "project_ray_data_on_mesh"
2: 50% completed
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
2: 60% completed
1: Updating the ensemble members...
1: Done.
2: Performing data assimilation at time 0.0316...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Leaving test case "material_deposition"; testing time: 30169773us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Entering test case "deposition_from_scan_path_2d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Leaving test case "deposition_from_scan_path_2d"; testing time: 360us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Entering test case "deposition_from_scan_path_3d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Leaving test case "deposition_from_scan_path_3d"; testing time: 174us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Entering test case "deposition_from_L_scan_path_3d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Leaving test case "deposition_from_L_scan_path_3d"; testing time: 4435us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Entering test case "deposition_from_diagonal_scan_path_3d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Leaving test case "deposition_from_diagonal_scan_path_3d"; testing time: 1566us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Entering test case "merge_multiple_deposition_paths"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Leaving test case "merge_multiple_deposition_paths"; testing time: 110us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Entering test case "deposition_quaternion_straight_line"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Leaving test case "deposition_quaternion_straight_line"; testing time: 4072us
41: Leaving test module "MaterialDeposition"; testing time: 30812748us
41: 
41: *** No errors detected
41: 
27/48 Test #41: test_material_deposition_1 ...............   Passed   31.90 sec
test 43
      Start 43: test_microstructure_1

43: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_microstructure"
43: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
43: Test timeout computed to be: 7200
43: Running 1 test case...
43: Entering test module "MicroStructure"
43: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Entering test case "G_and_R"
43: 
43: *** No errors detected
43: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Leaving test case "G_and_R"; testing time: 357458us
43: Leaving test module "MicroStructure"; testing time: 357528us
43: 
28/48 Test #43: test_microstructure_1 ....................   Passed    1.51 sec
test 45
      Start 45: test_thermal_physics_1

45: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_physics"
45: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
45: Test timeout computed to be: 7200
45: Running 7 test cases...
45: Entering test module "ThermalPhysics"
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Entering test case "thermal_2d_explicit_host"
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Leaving test case "thermal_2d_explicit_host"; testing time: 262502us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Entering test case "thermal_2d_manufactured_solution_host"
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Leaving test case "thermal_2d_manufactured_solution_host"; testing time: 234438us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Entering test case "initial_temperature_host"
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Leaving test case "initial_temperature_host"; testing time: 253988us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Entering test case "energy_conservation_host"
1: 50% completed
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
1: 60% completed
13: 50% completed
2: 70% completed
1: Performing data assimilation at time 0.0316...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Leaving test case "energy_conservation_host"; testing time: 21846359us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Entering test case "radiation_bcs_host"
2: 80% completed
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Leaving test case "radiation_bcs_host"; testing time: 4576422us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Entering test case "convection_bcs_host"
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
2: 90% completed
1: Updating the ensemble members...
1: Done.
2: 100% completed
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 2 frame(s).
2: Starting the main time stepping loop...
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 2 frame(s).
2: Starting the main time stepping loop...
1: 70% completed
2: 10% completed
2: 20% completed
2: 30% completed
2: 40% completed
1: 80% completed
2: Performing data assimilation at time 0.0211...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: 10% completed
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
2: 50% completed
1: 90% completed
2: 20% completed
2: 60% completed
2: Performing data assimilation at time 0.0316...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: 30% completed
2: Updating the ensemble members...
2: Done.
2: 70% completed
1: 100% completed
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 2 frame(s).
2: 80% completed
1: Starting the main time stepping loop...
2: 40% completed
2: 90% completed
2: Performing data assimilation at time 0.0211...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: 100% completed
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 140340583us
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(225): Leaving test case "project_ray_data_on_mesh"; testing time: 101156263us
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(302): Entering test case "project_ray_data_on_nonaligned_mesh"
10: 
10: *** No errors detected
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(302): Leaving test case "project_ray_data_on_nonaligned_mesh"; testing time: 263329us
10: Leaving test module "ExperimentaData"; testing time: 101920405us
10: 
 3/48 Test #10: test_experimental_data_1 .................   Passed  104.92 sec
test 11
      Start 11: test_geometry_1

11: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_geometry"
11: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
11: Test timeout computed to be: 7200
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
1: 10% completed
11: Running 6 test cases...
11: Entering test module "Geometry"
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(61): Entering test case "geometry_2D"
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(61): Leaving test case "geometry_2D"; testing time: 40980us
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(86): Entering test case "geometry_3D"
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(86): Leaving test case "geometry_3D"; testing time: 100292us
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(113): Entering test case "geometry_shifted_origin"
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(113): Leaving test case "geometry_shifted_origin"; testing time: 104798us
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(148): Entering test case "gmsh"
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(148): Leaving test case "gmsh"; testing time: 368757us
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(171): Entering test case "read_stl"
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(171): Leaving test case "read_stl"; testing time: 112645us
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(232): Entering test case "geometry_stl_mesh"
11: 
11: *** No errors detected
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(232): Leaving test case "geometry_stl_mesh"; testing time: 87829us
11: Leaving test module "Geometry"; testing time: 816010us
11: 
 4/48 Test #11: test_geometry_1 ..........................   Passed    4.28 sec
test 12
      Start 12: test_heat_source_1

12: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_heat_source"
12: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
12: Test timeout computed to be: 7200
2: Updating the ensemble members...
2: Done.
1: 20% completed
12: Running 6 test cases...
12: Entering test module "HeatSource"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(104): Entering test case "gaussian_heat_source_value_2d"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(104): Leaving test case "gaussian_heat_source_value_2d"; testing time: 17415us
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(109): Entering test case "gaussian_heat_source_value_3d"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(109): Leaving test case "gaussian_heat_source_value_3d"; testing time: 245us
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(114): Entering test case "heat_source_value_2d"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(114): Leaving test case "heat_source_value_2d"; testing time: 299us
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(190): Entering test case "heat_source_vectorized_value_2d"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(190): Leaving test case "heat_source_vectorized_value_2d"; testing time: 276us
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(315): Entering test case "heat_source_value_3d"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(315): Leaving test case "heat_source_value_3d"; testing time: 290us
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(381): Entering test case "heat_source_vectorized_value_3d"
12: 
12: *** No errors detected
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(381): Leaving test case "heat_source_vectorized_value_3d"; testing time: 274us
12: Leaving test module "HeatSource"; testing time: 20021us
12: 
 5/48 Test #12: test_heat_source_1 .......................   Passed    4.29 sec
test 13
      Start 13: test_integration_3d_device_1

13: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_device"
13: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
13: Test timeout computed to be: 7200
13: Running 2 test cases...
13: Entering test module "Integration_3D_Device"
13: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_device.cc(19): Entering test case "integration_3D_device"
2: 50% completed
1: 30% completed
1: 40% completed
2: 60% completed
1: Performing data assimilation at time 0.0211...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Performing data assimilation at time 0.0316...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
1: Updating the ensemble members...
1: Done.
2: Updating the ensemble members...
2: Done.
1: 50% completed
2: 70% completed
1: 60% completed
2: 80% completed
1: Performing data assimilation at time 0.0316...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
13: 60% completed
2: 90% completed
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Leaving test case "convection_bcs_host"; testing time: 131238940us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Entering test case "reference_temperature_host"
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Leaving test case "reference_temperature_host"; testing time: 278806us
45: Leaving test module "ThermalPhysics"; testing time: 158726950us
45: 
45: *** No errors detected
45: 
29/48 Test #45: test_thermal_physics_1 ...................   Passed  159.80 sec
test 47
      Start 47: test_ensemble_management_1

47: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_ensemble_management"
47: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
47: Test timeout computed to be: 7200
47: Running 1 test case...
47: Entering test module "EnsembleManagement"
47: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Entering test case "database_ensemble"
47: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Leaving test case "database_ensemble"; testing time: 3772us
47: Leaving test module "EnsembleManagement"; testing time: 3802us
47: 
47: *** No errors detected
47: 
30/48 Test #47: test_ensemble_management_1 ...............   Passed    1.10 sec
1: Updating the ensemble members...
1: Done.
2: 100% completed
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 227184064us
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: Starting the main time stepping loop...
2: Rank: 1 | Old parameters for member 2: 
2: Rank: 1 | Number expt sites mapped to DOFs: 1
2: 10% completed
1: 70% completed
2: 20% completed
2: 30% completed
2: 40% completed
2: 50% completed
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
2: 60% completed
2: 70% completed
2: 80% completed
2: 90% completed
2: 100% completed
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: Starting the main time stepping loop...
2: 10% completed
2: 20% completed
2: 30% completed
2: 40% completed
2: 50% completed
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
2: 60% completed
2: 70% completed
2: 80% completed
2: 90% completed
1: 80% completed
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: 100% completed
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 97540156us
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
2: Starting the main time stepping loop...
2: 10% completed
2: 20% completed
2: 30% completed
2: 40% completed
2: 50% completed
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
2: 60% completed
2: 70% completed
2: 80% completed
1: 90% completed
2: 90% completed
2: 100% completed
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 21054543us
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: Starting the main time stepping loop...
2: Rank: 1 | Old parameters for member 2: 
2: Rank: 1 | Number expt sites mapped to DOFs: 1
2: 10% completed
2: 20% completed
2: 30% completed
2: 40% completed
2: 50% completed
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
2: 60% completed
2: 70% completed
1: 100% completed
2: 80% completed
2: 90% completed
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 255306810us
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
2: 100% completed
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: Starting the main time stepping loop...
1: Starting the main time stepping loop...
2: 10% completed
2: 20% completed
2: 30% completed
2: 40% completed
2: 50% completed
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
2: 60% completed
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: 70% completed
2: 80% completed
2: 90% completed
2: Starting the main time stepping loop...
2: 100% completed
1: 10% completed
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 20560119us
2: Leaving test module "Integration_Data_Assimilation"; testing time: 258441010us
2: 
2: *** No errors detected
1: 20% completed
1: 30% completed
1: 40% completed
2: 10% completed
1: 50% completed
2: 20% completed
1: Performing data assimilation at time 0.12...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
2: 30% completed
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
2: 40% completed
1: Updating the ensemble members...
1: Done.
1: 60% completed
2: 50% completed
1: 70% completed
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
1: 80% completed
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
1: 90% completed
2: Updating the ensemble members...
2: Done.
2: 60% completed
2: 70% completed
2: 80% completed
2: 90% completed
1: 100% completed
2: 100% completed
2: 
2: *** No errors detected
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 17127545us
2: Leaving test module "Integration_Data_Assimilation"; testing time: 265366271us
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: 
 6/48 Test  #2: test_integration_da_2 ....................   Passed  268.19 sec
test 6
      Start  6: test_closest_source_point_adaptation_2

6: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_closest_source_point_adaptation"
6: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
6: Test timeout computed to be: 7200
1: Starting the main time stepping loop...
1: 10% completed
1: 20% completed
6: Running 1 test case...
6: Entering test module "ClosestSourcePointAdaptation"
6: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
1: 30% completed
6: Running 1 test case...
6: Entering test module "ClosestSourcePointAdaptation"
6: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
1: 40% completed
1: 50% completed
1: Performing data assimilation at time 0.12...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
1: Updating the ensemble members...
1: Done.
1: 60% completed
1: 70% completed
1: 80% completed
1: 90% completed
1: 100% completed
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 19848497us
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 1 frame(s).
1: Starting the main time stepping loop...
13: 10% completed
1: 10% completed
1: 20% completed
1: 30% completed
1: 40% completed
1: 50% completed
1: Performing data assimilation at time 0.12...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
1: Updating the ensemble members...
1: Done.
1: 60% completed
1: 70% completed
1: 80% completed
1: 90% completed
6: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 19866037us
6: Leaving test module "ClosestSourcePointAdaptation"; testing time: 19866114us
6: 
6: *** No errors detected
6: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 19707261us
6: Leaving test module "ClosestSourcePointAdaptation"; testing time: 19707308us
6: 
6: *** No errors detected
1: 100% completed
6: 
 7/48 Test  #6: test_closest_source_point_adaptation_2 ...   Passed   22.24 sec
test 14
      Start 14: test_material_property_1

14: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_material_property"
14: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
14: Test timeout computed to be: 7200
test 15
      Start 15: test_material_property_device_1

15: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_material_property_device"
15: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
15: Test timeout computed to be: 7200
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 1 frame(s).
15: Running 4 test cases...
15: Entering test module "MaterialPropertyDevice"
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(13): Entering test case "material_property_device"
1: Starting the main time stepping loop...
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(13): Leaving test case "material_property_device"; testing time: 200283us
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(18): Entering test case "ratios_device"
14: Running 4 test cases...
14: Entering test module "MaterialProperty"
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(13): Entering test case "material_property_host"
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(18): Leaving test case "ratios_device"; testing time: 165140us
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(20): Entering test case "material_property_table_device"
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(13): Leaving test case "material_property_host"; testing time: 129169us
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(18): Entering test case "ratios_host"
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(20): Leaving test case "material_property_table_device"; testing time: 109404us
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(25): Entering test case "material_property_polynomials_device"
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(18): Leaving test case "ratios_host"; testing time: 135253us
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(20): Entering test case "material_property_table_host"
15: 
15: *** No errors detected
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(25): Leaving test case "material_property_polynomials_device"; testing time: 158846us
15: Leaving test module "MaterialPropertyDevice"; testing time: 633852us
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(20): Leaving test case "material_property_table_host"; testing time: 157379us
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(25): Entering test case "material_property_polynomials_host"
14: 
14: *** No errors detected
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(25): Leaving test case "material_property_polynomials_host"; testing time: 146883us
14: Leaving test module "MaterialProperty"; testing time: 568870us
15: 
 8/48 Test #15: test_material_property_device_1 ..........   Passed    3.32 sec
test 16
      Start 16: test_mechanical_operator_1

16: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_mechanical_operator"
16: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
16: Test timeout computed to be: 7200
14: 
 9/48 Test #14: test_material_property_1 .................   Passed    3.47 sec
test 17
      Start 17: test_mechanical_physics_1

17: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_mechanical_physics"
17: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
17: Test timeout computed to be: 7200
1: 10% completed
1: 20% completed
1: 30% completed
1: 40% completed
1: 50% completed
1: Performing data assimilation at time 0.12...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
16: Running 3 test cases...
16: Entering test module "MechanicalOperator"
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(72): Entering test case "elastostatic"
17: Running 8 test cases...
17: Entering test module "MechanicalPhysics"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(197): Entering test case "elastostatic"
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
1: Updating the ensemble members...
1: Done.
1: 60% completed
1: 70% completed
1: 80% completed
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(197): Leaving test case "elastostatic"; testing time: 3059854us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(275): Entering test case "elastoplastic_residual"
1: 90% completed
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(275): Leaving test case "elastoplastic_residual"; testing time: 2540942us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(396): Entering test case "fe_nothing"
1: 100% completed
1: 
1: *** No errors detected
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 25911206us
1: Leaving test module "Integration_Data_Assimilation"; testing time: 301066649us
1: 
10/48 Test  #1: test_integration_da_1 ....................   Passed  304.02 sec
test 18
      Start 18: test_post_processor_1

18: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_post_processor"
18: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
18: Test timeout computed to be: 7200
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(396): Leaving test case "fe_nothing"; testing time: 2684497us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(663): Entering test case "thermoelastic_eshelby"
18: Running 2 test cases...
18: Entering test module "PostProcessor"
18: /var/jenkins/workspace/adamantine-nightly/tests/test_post_processor.cc(27): Entering test case "thermal_post_processor"
18: /var/jenkins/workspace/adamantine-nightly/tests/test_post_processor.cc(27): Leaving test case "thermal_post_processor"; testing time: 1381065us
18: /var/jenkins/workspace/adamantine-nightly/tests/test_post_processor.cc(149): Entering test case "mechanical_post_processor"
18: 
18: *** No errors detected
18: /var/jenkins/workspace/adamantine-nightly/tests/test_post_processor.cc(149): Leaving test case "mechanical_post_processor"; testing time: 17090499us
18: Leaving test module "PostProcessor"; testing time: 18471640us
18: 
11/48 Test #18: test_post_processor_1 ....................   Passed   24.55 sec
test 19
      Start 19: test_quaternion_1

19: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_quaternion"
19: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
19: Test timeout computed to be: 7200
13: 70% completed
19: Running 1 test case...
19: Entering test module "Quaternion"
19: /var/jenkins/workspace/adamantine-nightly/tests/test_quaternion.cc(11): Entering test case "rotation"
19: 
19: *** No errors detected
19: /var/jenkins/workspace/adamantine-nightly/tests/test_quaternion.cc(11): Leaving test case "rotation"; testing time: 373us
19: Leaving test module "Quaternion"; testing time: 400us
19: 
12/48 Test #19: test_quaternion_1 ........................   Passed    7.24 sec
test 20
      Start 20: test_scan_path_1

20: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_scan_path"
20: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
20: Test timeout computed to be: 7200
20: Running 3 test cases...
20: Entering test module "ScanPath"
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(36): Entering test case "scan_path"
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(36): Leaving test case "scan_path"; testing time: 27805us
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(78): Entering test case "scan_path_location"
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(78): Leaving test case "scan_path_location"; testing time: 157us
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(106): Entering test case "five_axis"
20: 
20: *** No errors detected
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(106): Leaving test case "five_axis"; testing time: 39288us
20: Leaving test module "ScanPath"; testing time: 67889us
20: 
13/48 Test #20: test_scan_path_1 .........................   Passed    6.09 sec
test 21
      Start 21: test_thermal_operator_1

21: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_operator"
21: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
21: Test timeout computed to be: 7200
21: Running 6 test cases...
21: Entering test module "ThermalOperator"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(41): Entering test case "thermal_operator"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(41): Leaving test case "thermal_operator"; testing time: 630813us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(148): Entering test case "spmv"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(148): Leaving test case "spmv"; testing time: 921652us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(265): Entering test case "spmv_anisotropic"
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(72): Leaving test case "elastostatic"; testing time: 52893533us
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(302): Entering test case "thermoelastic"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(265): Leaving test case "spmv_anisotropic"; testing time: 973191us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(415): Entering test case "spmv_anisotropic_angle"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(415): Leaving test case "spmv_anisotropic_angle"; testing time: 3244822us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(580): Entering test case "spmv_rad"
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(302): Leaving test case "thermoelastic"; testing time: 14591098us
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(393): Entering test case "jacobian"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(580): Leaving test case "spmv_rad"; testing time: 10635206us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(772): Entering test case "spmv_conv"
16: 
16: *** No errors detected
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(393): Leaving test case "jacobian"; testing time: 689116us
16: Leaving test module "MechanicalOperator"; testing time: 68174851us
16: 
14/48 Test #16: test_mechanical_operator_1 ...............   Passed   71.49 sec
test 22
      Start 22: test_thermal_operator_device_1

22: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_operator_device"
22: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
22: Test timeout computed to be: 7200
22: Running 4 test cases...
22: Entering test module "ThermalOperatorDevice"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(31): Entering test case "thermal_operator_dev"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(31): Leaving test case "thermal_operator_dev"; testing time: 445013us
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(124): Entering test case "spmv"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(124): Leaving test case "spmv"; testing time: 404954us
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(237): Entering test case "mf_spmv"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(237): Leaving test case "mf_spmv"; testing time: 3382421us
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(375): Entering test case "spmv_anisotropic_angle"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(375): Leaving test case "spmv_anisotropic_angle"; testing time: 1137380us
22: Leaving test module "ThermalOperatorDevice"; testing time: 5371066us
22: 
22: *** No errors detected
22: 
15/48 Test #22: test_thermal_operator_device_1 ...........   Passed    8.11 sec
test 23
      Start 23: test_thermal_physics_device_1

23: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_physics_device"
23: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
23: Test timeout computed to be: 7200
21: 
21: *** No errors detected
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(772): Leaving test case "spmv_conv"; testing time: 9450911us
21: Leaving test module "ThermalOperator"; testing time: 25858637us
21: 
16/48 Test #21: test_thermal_operator_1 ..................   Passed   32.36 sec
test 24
      Start 24: test_timer_1

24: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_timer"
24: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
24: Test timeout computed to be: 7200
23: Running 4 test cases...
23: Entering test module "ThermalPhysicsDevice"
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(13): Entering test case "thermal_2d_explicit_device"
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(13): Leaving test case "thermal_2d_explicit_device"; testing time: 634030us
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(26): Entering test case "thermal_2d_manufactured_solution_device"
24: Running 1 test case...
24: Entering test module "Timer"
24: /var/jenkins/workspace/adamantine-nightly/tests/test_timer.cc(15): Entering test case "test_timer"
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(26): Leaving test case "thermal_2d_manufactured_solution_device"; testing time: 458930us
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(31): Entering test case "initial_temperature_device"
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(31): Leaving test case "initial_temperature_device"; testing time: 208514us
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(36): Entering test case "energy_conservation_device"
24: 
24: *** No errors detected
24: /var/jenkins/workspace/adamantine-nightly/tests/test_timer.cc(15): Leaving test case "test_timer"; testing time: 611197us
24: Leaving test module "Timer"; testing time: 611251us
24: 
17/48 Test #24: test_timer_1 .............................   Passed    4.04 sec
test 25
      Start 25: test_utils_1

25: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_utils"
25: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
25: Test timeout computed to be: 7200
25: Running 1 test case...
25: Entering test module "utils"
25: /var/jenkins/workspace/adamantine-nightly/tests/test_utils.cc(11): Entering test case "utils"
25: 
25: *** No errors detected
25: /var/jenkins/workspace/adamantine-nightly/tests/test_utils.cc(11): Leaving test case "utils"; testing time: 214us
25: Leaving test module "utils"; testing time: 239us
25: 
18/48 Test #25: test_utils_1 .............................   Passed    2.65 sec
test 26
      Start 26: test_validate_input_database_1

26: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_validate_input_database"
26: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
26: Test timeout computed to be: 7200
26: Running 3 test cases...
26: Entering test module "validate_input_database"
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(14): Entering test case "expected_passes"
26: Test case expected_passes did not check any assertions
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(14): Leaving test case "expected_passes"; testing time: 706us
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(55): Entering test case "parse_test_input_files"
26: Test case parse_test_input_files did not check any assertions
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(55): Leaving test case "parse_test_input_files"; testing time: 77728us
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(76): Entering test case "expected_failures"
26: 
26: *** No errors detected
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(76): Leaving test case "expected_failures"; testing time: 7122us
26: Leaving test module "validate_input_database"; testing time: 85662us
26: 
19/48 Test #26: test_validate_input_database_1 ...........   Passed    3.10 sec
test 27
      Start 27: test_integration_2d_1

27: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_2d"
27: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
27: Test timeout computed to be: 7200
27: Running 3 test cases...
27: Entering test module "Integration_2D"
27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Entering test case "integration_2D"
27: 10% completed
27: 20% completed
27: 30% completed
27: 40% completed
27: 50% completed
27: 60% completed
27: 70% completed
27: 80% completed
27: 90% completed
27: 100% completed
27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Leaving test case "integration_2D"; testing time: 9542658us
27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Entering test case "integration_2D_ensemble"
27: Starting the main time stepping loop...
27: 10% completed
27: 20% completed
27: 30% completed
27: 40% completed
27: 50% completed
27: 60% completed
27: 70% completed
27: 80% completed
27: 90% completed
13: 20% completed
27: 100% completed
27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Leaving test case "integration_2D_ensemble"; testing time: 28739700us
27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Entering test case "integration_2D_units"
13: 80% completed
27: 10% completed
27: 20% completed
27: 30% completed
27: 40% completed
27: 50% completed
27: 60% completed
27: 70% completed
27: 80% completed
27: 90% completed
27: 100% completed
27: 
27: *** No errors detected
27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Leaving test case "integration_2D_units"; testing time: 9632648us
27: Leaving test module "Integration_2D"; testing time: 47915929us
27: 
20/48 Test #27: test_integration_2d_1 ....................   Passed   51.47 sec
test 29
      Start 29: test_integration_2d_device_1

29: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_2d_device"
29: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
29: Test timeout computed to be: 7200
29: Running 1 test case...
29: Entering test module "Integration_2D_Device"
29: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Entering test case "intregation_2D_device"
29: 10% completed
29: 20% completed
29: 30% completed
29: 40% completed
29: 50% completed
29: 60% completed
29: 70% completed
29: 80% completed
29: 90% completed
29: 100% completed
29: 
29: *** No errors detected
29: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Leaving test case "intregation_2D_device"; testing time: 13239585us
29: Leaving test module "Integration_2D_Device"; testing time: 13239876us
29: 
21/48 Test #29: test_integration_2d_device_1 .............   Passed   18.47 sec
test 31
      Start 31: test_integration_3d_1

31: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d"
31: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
31: Test timeout computed to be: 7200
31: Running 5 test cases...
31: Entering test module "Integration_3D"
31: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Entering test case "integration_3D"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(663): Leaving test case "thermoelastic_eshelby"; testing time: 218567467us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(691): Entering test case "elastoplastic_radial_return"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(691): Leaving test case "elastoplastic_radial_return"; testing time: 1399700us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(848): Entering test case "cell_data_transfer_refine_coarsen"
13: 90% completed
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(848): Leaving test case "cell_data_transfer_refine_coarsen"; testing time: 15343638us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(958): Entering test case "thermoelastic_stress_uniform_heating"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(958): Leaving test case "thermoelastic_stress_uniform_heating"; testing time: 1199510us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(1063): Entering test case "thermoelastoplastic_radial_return"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(1063): Leaving test case "thermoelastoplastic_radial_return"; testing time: 2395960us
17: Leaving test module "MechanicalPhysics"; testing time: 247192247us
17: 
17: *** No errors detected
17: 
22/48 Test #17: test_mechanical_physics_1 ................   Passed  250.50 sec
test 33
      Start 33: test_integration_3d_amr_1

33: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_amr"
33: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
33: Test timeout computed to be: 7200
23: 
23: *** No errors detected
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(36): Leaving test case "energy_conservation_device"; testing time: 167464717us
23: Leaving test module "ThermalPhysicsDevice"; testing time: 168766375us
23: 
23/48 Test #23: test_thermal_physics_device_1 ............   Passed  172.35 sec
test 35
      Start 35: test_integration_3d_amr_device_1

35: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_amr_device"
35: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
35: Test timeout computed to be: 7200
31: 10% completed
33: Running 2 test cases...
33: Entering test module "Integration_3D_AMR"
33: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Entering test case "integration_3D_amr"
35: Running 1 test case...
35: Entering test module "Integration_3D_AMR"
35: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Entering test case "integration_3D_amr_device"
33: 10% completed
33: 20% completed
33: 30% completed
33: 40% completed
33: 50% completed
13: 30% completed
33: 60% completed
33: 70% completed
31: 10% completed
33: 80% completed
33: 90% completed
33: 100% completed
33: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Leaving test case "integration_3D_amr"; testing time: 41660783us
33: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Entering test case "integration_3D_amr_refine_coarsen"
35: 10% completed
13: 100% completed
13: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_device.cc(19): Leaving test case "integration_3D_device"; testing time: 1263759931us
13: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_device.cc(46): Entering test case "integration_3D_checkpoint_restart_device"
35: 20% completed
31: 20% completed
33: 10% completed
31: 30% completed
35: 30% completed
13: 10% completed
31: 40% completed
13: 20% completed
13: 30% completed
35: 40% completed
13: 40% completed
33: 20% completed
31: 20% completed
13: 40% completed
13: 50% completed
35: 50% completed
31: 50% completed
13: 60% completed
33: 30% completed
13: 70% completed
31: 60% completed
35: 60% completed
31: 70% completed
13: Checkpoint reached
13: 80% completed
13: 90% completed
33: 40% completed
13: 100% completed
35: 70% completed
13: Restarting from file
13: 80% completed
13: 90% completed
13: 100% completed
13: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_device.cc(46): Leaving test case "integration_3D_checkpoint_restart_device"; testing time: 262961422us
13: Leaving test module "Integration_3D_Device"; testing time: 1526722041us
13: 
13: *** No errors detected
13: 
31/48 Test #13: test_integration_3d_device_1 .............   Passed  1527.62 sec
test 28
      Start 28: test_integration_2d_2

28: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_2d"
28: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
28: Test timeout computed to be: 7200
28: Running 3 test cases...
28: Running 3 test cases...
28: Entering test module "Integration_2D"
28: Entering test module "Integration_2D"
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Entering test case "integration_2D"
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Entering test case "integration_2D"
28: 10% completed
28: 20% completed
28: 30% completed
28: 40% completed
28: 50% completed
28: 60% completed
28: 70% completed
28: 80% completed
28: 90% completed
28: 100% completed
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Leaving test case "integration_2D"; testing time: 2970514us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Entering test case "integration_2D_ensemble"
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Leaving test case "integration_2D"; testing time: 2970798us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Entering test case "integration_2D_ensemble"
28: Starting the main time stepping loop...
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Leaving test case "integration_2D_ensemble"; testing time: 1745420us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Entering test case "integration_2D_units"
28: 10% completed
28: 20% completed
28: 30% completed
28: 40% completed
28: 50% completed
28: 60% completed
28: 70% completed
28: 80% completed
28: 90% completed
28: 100% completed
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Leaving test case "integration_2D_ensemble"; testing time: 7483286us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Entering test case "integration_2D_units"
28: 10% completed
28: 20% completed
28: 30% completed
28: 40% completed
28: 50% completed
28: 60% completed
28: 70% completed
28: 80% completed
28: 90% completed
28: 100% completed
28: 
28: *** No errors detected
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Leaving test case "integration_2D_units"; testing time: 3013078us
28: Leaving test module "Integration_2D"; testing time: 13467820us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Leaving test case "integration_2D_units"; testing time: 8750704us
28: Leaving test module "Integration_2D"; testing time: 13467954us
28: 
28: *** No errors detected
28: 
32/48 Test #28: test_integration_2d_2 ....................   Passed   14.40 sec
test 30
      Start 30: test_integration_2d_device_2

30: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_2d_device"
30: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
30: Test timeout computed to be: 7200
30: Running 1 test case...
30: Running 1 test case...
30: Entering test module "Integration_2D_Device"
30: Entering test module "Integration_2D_Device"
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Entering test case "intregation_2D_device"
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Entering test case "intregation_2D_device"
30: 10% completed
30: 20% completed
30: 30% completed
30: 40% completed
30: 50% completed
30: 60% completed
30: 70% completed
30: 80% completed
30: 90% completed
30: 100% completed
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Leaving test case "intregation_2D_device"; testing time: 4097366us
30: Leaving test module "Integration_2D_Device"; testing time: 4097716us
30: 
30: *** No errors detected
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Leaving test case "intregation_2D_device"; testing time: 4097748us
30: Leaving test module "Integration_2D_Device"; testing time: 4098223us
30: 
30: *** No errors detected
30: 
33/48 Test #30: test_integration_2d_device_2 .............   Passed    5.03 sec
test 32
      Start 32: test_integration_3d_2

32: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d"
32: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
32: Test timeout computed to be: 7200
32: Running 5 test cases...
32: Running 5 test cases...
32: Entering test module "Integration_3D"
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Entering test case "integration_3D"
32: Entering test module "Integration_3D"
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Entering test case "integration_3D"
31: 80% completed
33: 50% completed
35: 80% completed
31: 30% completed
31: 90% completed
13: 50% completed
32: 10% completed
31: 100% completed
31: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Leaving test case "integration_3D"; testing time: 504135624us
31: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Entering test case "integration_3D_short"
35: 90% completed
32: 20% completed
32: 30% completed
33: 60% completed
32: 40% completed
33: 70% completed
35: 100% completed
35: 
35: *** No errors detected
35: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Leaving test case "integration_3D_amr_device"; testing time: 462099372us
35: Leaving test module "Integration_3D_AMR"; testing time: 462099674us
35: 
24/48 Test #35: test_integration_3d_amr_device_1 .........   Passed  466.60 sec
test 37
      Start 37: test_integration_da_augmented_1

37: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da_augmented"
37: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
37: Test timeout computed to be: 7200
32: 50% completed
37: Running 1 test case...
37: Entering test module "Integration_Data_Assimilation_Augmented"
37: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Entering test case "integration_3D_data_assimilation_augmented"
33: 80% completed
32: 60% completed
37: Reading the experimental log file...
37: Done. Log entries found for 1 camera(s), with 2 frame(s).
37: Starting the main time stepping loop...
32: 70% completed
32: 80% completed
32: 90% completed
32: 100% completed
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Leaving test case "integration_3D"; testing time: 133620590us
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Entering test case "integration_3D_short"
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Leaving test case "integration_3D"; testing time: 133640085us
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Entering test case "integration_3D_short"
33: 90% completed
37: 10% completed
33: 100% completed
33: 
33: *** No errors detected
33: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Leaving test case "integration_3D_amr_refine_coarsen"; testing time: 483917679us
33: Leaving test module "Integration_3D_AMR"; testing time: 525579061us
33: 
25/48 Test #33: test_integration_3d_amr_1 ................   Passed  530.42 sec
test 39
      Start 39: test_integration_thermoelastic_1

39: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic"
39: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
39: Test timeout computed to be: 7200
39: Running 2 test cases...
39: Entering test module "Integration_Thermoelastic"
39: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(19): Entering test case "integration_thermoelastic"
37: 20% completed
37: 30% completed
37: 40% completed
13: 60% completed
37: 50% completed
37: 60% completed
37: 70% completed
37: Performing data assimilation at time 0.04...
37: Rank: 0 | Old parameters for member 0: 0.413453 
37: Rank: 0 | Old parameters for member 1: 0.385362 
37: Rank: 0 | Old parameters for member 2: 0.446065 
37: Rank: 0 | Number expt sites mapped to DOFs: 2
37: Getting the perturbed innovation...
37: Applying the Kalman gain...
37: Updating the ensemble members...
37: Done.
37: Rank: 0 | New parameters for member 0: 0.121104 
37: Rank: 0 | New parameters for member 1: 0.142225 
37: Rank: 0 | New parameters for member 2: 0.107206 
37: 80% completed
37: 90% completed
37: 100% completed
37: 
37: *** No errors detected
37: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Leaving test case "integration_3D_data_assimilation_augmented"; testing time: 223602134us
37: Leaving test module "Integration_Data_Assimilation_Augmented"; testing time: 223602889us
37: 
26/48 Test #37: test_integration_da_augmented_1 ..........   Passed  227.84 sec
test 41
      Start 41: test_material_deposition_1

41: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_material_deposition"
41: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
41: Test timeout computed to be: 7200
41: Running 11 test cases...
41: Entering test module "MaterialDeposition"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Entering test case "read_material_deposition_file_2d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Leaving test case "read_material_deposition_file_2d"; testing time: 21425us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Entering test case "read_material_deposition_file_3d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Leaving test case "read_material_deposition_file_3d"; testing time: 29421us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(134): Entering test case "get_elements_to_activate_2d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(134): Leaving test case "get_elements_to_activate_2d"; testing time: 212559us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(195): Entering test case "get_elements_to_activate_3d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(195): Leaving test case "get_elements_to_activate_3d"; testing time: 761783us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Entering test case "material_deposition"
39: 10% completed
13: 70% completed
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Leaving test case "material_deposition"; testing time: 46059611us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Entering test case "deposition_from_scan_path_2d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Leaving test case "deposition_from_scan_path_2d"; testing time: 11698us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Entering test case "deposition_from_scan_path_3d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Leaving test case "deposition_from_scan_path_3d"; testing time: 223us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Entering test case "deposition_from_L_scan_path_3d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Leaving test case "deposition_from_L_scan_path_3d"; testing time: 37274us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Entering test case "deposition_from_diagonal_scan_path_3d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Leaving test case "deposition_from_diagonal_scan_path_3d"; testing time: 43753us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Entering test case "merge_multiple_deposition_paths"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Leaving test case "merge_multiple_deposition_paths"; testing time: 135us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Entering test case "deposition_quaternion_straight_line"
41: 
41: *** No errors detected
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Leaving test case "deposition_quaternion_straight_line"; testing time: 26899us
41: Leaving test module "MaterialDeposition"; testing time: 47206751us
41: 
27/48 Test #41: test_material_deposition_1 ...............   Passed   50.38 sec
test 43
      Start 43: test_microstructure_1

43: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_microstructure"
43: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
43: Test timeout computed to be: 7200
31: 40% completed
43: Running 1 test case...
43: Entering test module "MicroStructure"
43: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Entering test case "G_and_R"
43: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Leaving test case "G_and_R"; testing time: 1012255us
43: Leaving test module "MicroStructure"; testing time: 1012299us
43: 
43: *** No errors detected
43: 
28/48 Test #43: test_microstructure_1 ....................   Passed    6.00 sec
test 45
      Start 45: test_thermal_physics_1

45: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_physics"
45: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
45: Test timeout computed to be: 7200
45: Running 7 test cases...
45: Entering test module "ThermalPhysics"
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Entering test case "thermal_2d_explicit_host"
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Leaving test case "thermal_2d_explicit_host"; testing time: 620798us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Entering test case "thermal_2d_manufactured_solution_host"
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Leaving test case "thermal_2d_manufactured_solution_host"; testing time: 609621us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Entering test case "initial_temperature_host"
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Leaving test case "initial_temperature_host"; testing time: 586624us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Entering test case "energy_conservation_host"
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Leaving test case "energy_conservation_host"; testing time: 40214441us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Entering test case "radiation_bcs_host"
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Leaving test case "radiation_bcs_host"; testing time: 10820592us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Entering test case "convection_bcs_host"
32: 10% completed
13: 80% completed
31: 50% completed
32: 20% completed
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Leaving test case "convection_bcs_host"; testing time: 233854163us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Entering test case "reference_temperature_host"
45: 
45: *** No errors detected
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Leaving test case "reference_temperature_host"; testing time: 736234us
45: Leaving test module "ThermalPhysics"; testing time: 287443305us
45: 
29/48 Test #45: test_thermal_physics_1 ...................   Passed  290.49 sec
test 47
      Start 47: test_ensemble_management_1

47: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_ensemble_management"
47: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
47: Test timeout computed to be: 7200
47: Running 1 test case...
47: Entering test module "EnsembleManagement"
47: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Entering test case "database_ensemble"
47: 
47: *** No errors detected
47: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Leaving test case "database_ensemble"; testing time: 231897us
47: Leaving test module "EnsembleManagement"; testing time: 231943us
47: 
30/48 Test #47: test_ensemble_management_1 ...............   Passed    5.45 sec
32: 30% completed
13: 90% completed
31: 60% completed
13: 100% completed
13: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_device.cc(19): Leaving test case "integration_3D_device"; testing time: 1611961964us
13: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_device.cc(46): Entering test case "integration_3D_checkpoint_restart_device"
32: 40% completed
13: 10% completed
32: 50% completed
13: 20% completed
13: 30% completed
13: 40% completed
32: 60% completed
13: 50% completed
13: 60% completed
31: 70% completed
13: 70% completed
31: 10% completed
31: 80% completed
13: Checkpoint reached
13: 80% completed
13: 90% completed
13: 100% completed
31: 90% completed
39: 20% completed
13: Restarting from file
13: 80% completed
32: 70% completed
31: 100% completed
31: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Leaving test case "integration_3D_short"; testing time: 2360702668us
31: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Entering test case "integration_3D_five_axis"
32: 80% completed
13: 90% completed
13: 100% completed
13: 
13: *** No errors detected
13: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_device.cc(46): Leaving test case "integration_3D_checkpoint_restart_device"; testing time: 463111655us
13: Leaving test module "Integration_3D_Device"; testing time: 2075074504us
13: 
31/48 Test #13: test_integration_3d_device_1 .............   Passed  2078.15 sec
test 28
      Start 28: test_integration_2d_2

28: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_2d"
28: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
28: Test timeout computed to be: 7200
28: Running 3 test cases...
28: Entering test module "Integration_2D"
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Entering test case "integration_2D"
28: Running 3 test cases...
28: Entering test module "Integration_2D"
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Entering test case "integration_2D"
28: 10% completed
28: 20% completed
28: 30% completed
28: 40% completed
32: 90% completed
28: 50% completed
28: 60% completed
28: 70% completed
28: 80% completed
28: 90% completed
28: 100% completed
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Leaving test case "integration_2D"; testing time: 6779909us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Entering test case "integration_2D_ensemble"
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Leaving test case "integration_2D"; testing time: 6451104us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Entering test case "integration_2D_ensemble"
28: Starting the main time stepping loop...
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Leaving test case "integration_2D_ensemble"; testing time: 3186384us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Entering test case "integration_2D_units"
28: 10% completed
28: 20% completed
28: 30% completed
28: 40% completed
28: 50% completed
28: 60% completed
28: 70% completed
28: 80% completed
28: 90% completed
28: 100% completed
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Leaving test case "integration_2D_ensemble"; testing time: 16241792us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Entering test case "integration_2D_units"
28: 10% completed
28: 20% completed
28: 30% completed
28: 40% completed
28: 50% completed
28: 60% completed
28: 70% completed
28: 80% completed
28: 90% completed
28: 100% completed
32: 100% completed
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Leaving test case "integration_3D_short"; testing time: 1212966789us
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Entering test case "integration_3D_five_axis"
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Leaving test case "integration_3D_short"; testing time: 1214455237us
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Entering test case "integration_3D_five_axis"
28: 
28: *** No errors detected
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Leaving test case "integration_2D_units"; testing time: 19652755us
28: Leaving test module "Integration_2D"; testing time: 29620040us
28: 
28: *** No errors detected
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Leaving test case "integration_2D_units"; testing time: 6597263us
28: Leaving test module "Integration_2D"; testing time: 29291177us
28: 
32/48 Test #28: test_integration_2d_2 ....................   Passed   33.83 sec
test 30
      Start 30: test_integration_2d_device_2

30: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_2d_device"
30: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
30: Test timeout computed to be: 7200
30: Running 1 test case...
30: Entering test module "Integration_2D_Device"
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Entering test case "intregation_2D_device"
30: Running 1 test case...
30: Entering test module "Integration_2D_Device"
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Entering test case "intregation_2D_device"
30: 10% completed
30: 20% completed
30: 30% completed
30: 40% completed
30: 50% completed
30: 60% completed
30: 70% completed
30: 80% completed
30: 90% completed
30: 100% completed
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Leaving test case "intregation_2D_device"; testing time: 8294207us
30: Leaving test module "Integration_2D_Device"; testing time: 8294561us
30: 
30: *** No errors detected
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Leaving test case "intregation_2D_device"; testing time: 7954682us
30: Leaving test module "Integration_2D_Device"; testing time: 7955028us
30: 
30: *** No errors detected
30: 
33/48 Test #30: test_integration_2d_device_2 .............   Passed   12.09 sec
test 32
      Start 32: test_integration_3d_2

32: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d"
32: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
32: Test timeout computed to be: 7200
32: Running 5 test cases...
32: Entering test module "Integration_3D"
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Entering test case "integration_3D"
32: Running 5 test cases...
32: Entering test module "Integration_3D"
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Entering test case "integration_3D"
32: 10% completed
32: 20% completed
32: 30% completed
32: 40% completed
31: 20% completed
32: 50% completed
32: 60% completed
32: 70% completed
32: 80% completed
32: 90% completed
32: 100% completed
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Leaving test case "integration_3D"; testing time: 221312914us
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Entering test case "integration_3D_short"
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Leaving test case "integration_3D"; testing time: 220885547us
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Entering test case "integration_3D_short"
31: 30% completed
32: 10% completed
39: 30% completed
32: 10% completed
31: 10% completed
32: 20% completed
32: 20% completed
39: 10% completed
31: 40% completed
32: 30% completed
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31: 50% completed
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31: 20% completed
39: 40% completed
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31: 60% completed
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32: 70% completed
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32: 80% completed
32: 90% completed
32: 100% completed
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Leaving test case "integration_3D_short"; testing time: 1946468549us
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Entering test case "integration_3D_five_axis"
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Leaving test case "integration_3D_short"; testing time: 1946760072us
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Entering test case "integration_3D_five_axis"
31: 70% completed
31: 80% completed
31: 30% completed
31: 90% completed
32: 60% completed
39: 50% completed
31: 100% completed
31: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Leaving test case "integration_3D_short"; testing time: 3793309586us
31: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Entering test case "integration_3D_five_axis"
39: 20% completed
32: 70% completed
32: 10% completed
31: 40% completed
32: 80% completed
39: 60% completed
32: 90% completed
32: 20% completed
31: 50% completed
39: 30% completed
32: 100% completed
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Leaving test case "integration_3D_five_axis"; testing time: 3968934183us
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(117): Entering test case "integration_3D_checkpoint_restart"
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Leaving test case "integration_3D_five_axis"; testing time: 3967422067us
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(117): Entering test case "integration_3D_checkpoint_restart"
32: 10% completed
32: 20% completed
32: 30% completed
32: 40% completed
32: 50% completed
32: 60% completed
32: 70% completed
32: Checkpoint reached
32: 80% completed
32: 90% completed
31: 10% completed
32: 100% completed
39: 70% completed
32: Restarting from file
32: 80% completed
32: 90% completed
32: 100% completed
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(117): Leaving test case "integration_3D_checkpoint_restart"; testing time: 151075752us
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(169): Entering test case "hourglass"
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(117): Leaving test case "integration_3D_checkpoint_restart"; testing time: 151075342us
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(169): Entering test case "hourglass"
32: n_time_step: 1 time: 0 n_dofs (thermal) after mesh refinement: 1172
32: n_time_step: 100 time: 0.99 n_dofs (thermal) after cell activation: 1178
32: 10% completed
32: n_time_step: 101 time: 1 n_dofs (thermal) after cell activation: 1178
32: n_time_step: 124 time: 1.23 n_dofs (thermal) after cell activation: 1181
32: n_time_step: 147 time: 1.46 n_dofs (thermal) after cell activation: 1184
32: 30% completed
32: n_time_step: 170 time: 1.69 n_dofs (thermal) after cell activation: 1187
34/48 Test #31: test_integration_3d_1 ....................***Timeout 7200.01 sec
32: n_time_step: 171 time: 1.7 n_dofs (thermal) after cell activation: 1187
32: n_time_step: 194 time: 1.93 n_dofs (thermal) after cell activation: 1190
32: 20% completed
32: n_time_step: 217 time: 2.16 n_dofs (thermal) after cell activation: 1193
32: n_time_step: 241 time: 2.4 n_dofs (thermal) after cell activation: 1196
32: n_time_step: 264 time: 2.63 n_dofs (thermal) after cell activation: 1199
32: n_time_step: 287 time: 2.86 n_dofs (thermal) after cell activation: 1202
32: n_time_step: 301 time: 3 n_dofs (thermal) after cell activation: 1204
32: 30% completed
32: n_time_step: 325 time: 3.24 n_dofs (thermal) after cell activation: 1205
32: n_time_step: 348 time: 3.47 n_dofs (thermal) after cell activation: 1206
39: 80% completed
32: n_time_step: 371 time: 3.7 n_dofs (thermal) after cell activation: 1207
32: n_time_step: 395 time: 3.94 n_dofs (thermal) after cell activation: 1208
32: 40% completed
32: n_time_step: 418 time: 4.17 n_dofs (thermal) after cell activation: 1209
32: n_time_step: 441 time: 4.4 n_dofs (thermal) after cell activation: 1210
32: n_time_step: 465 time: 4.64 n_dofs (thermal) after cell activation: 1211
35/48 Test #39: test_integration_thermoelastic_1 .........***Timeout 7200.02 sec
test 34
      Start 34: test_integration_3d_amr_2

34: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_amr"
34: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
34: Test timeout computed to be: 7200
34: Running 2 test cases...
34: Entering test module "Integration_3D_AMR"
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Entering test case "integration_3D_amr"
34: Running 2 test cases...
34: Entering test module "Integration_3D_AMR"
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Entering test case "integration_3D_amr"
34: 10% completed
34: 20% completed
34: 30% completed
34: 40% completed
34: 50% completed
34: 60% completed
34: 70% completed
34: 80% completed
34: 90% completed
34: 100% completed
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Leaving test case "integration_3D_amr"; testing time: 8331201us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Entering test case "integration_3D_amr_refine_coarsen"
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Leaving test case "integration_3D_amr"; testing time: 8330935us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Entering test case "integration_3D_amr_refine_coarsen"
34: 10% completed
32: n_time_step: 488 time: 4.87 n_dofs (thermal) after cell activation: 1212
34: 20% completed
32: 50% completed
34: 30% completed
34: 40% completed
34: 50% completed
32: 40% completed
32: n_time_step: 507 time: 5.06 n_dofs (thermal) after cell activation: 1216
34: 60% completed
34: 70% completed
34: 80% completed
34: 90% completed
34: 100% completed
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Leaving test case "integration_3D_amr_refine_coarsen"; testing time: 106101700us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Leaving test case "integration_3D_amr_refine_coarsen"; testing time: 106089ms
34: Leaving test module "Integration_3D_AMR"; testing time: 114433845us
34: 
34: *** No errors detected
34: Leaving test module "Integration_3D_AMR"; testing time: 114450224us
34: 
34: *** No errors detected
34: 
36/48 Test #34: test_integration_3d_amr_2 ................   Passed  115.25 sec
test 36
      Start 36: test_integration_3d_amr_device_2

36: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_amr_device"
36: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
36: Test timeout computed to be: 7200
36: Running 1 test case...
36: Entering test module "Integration_3D_AMR"
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Entering test case "integration_3D_amr_device"
36: Running 1 test case...
36: Entering test module "Integration_3D_AMR"
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Entering test case "integration_3D_amr_device"
36: 10% completed
36: 20% completed
36: 30% completed
36: 40% completed
32: n_time_step: 531 time: 5.3 n_dofs (thermal) after cell activation: 1217
36: 50% completed
36: 60% completed
36: 70% completed
36: 80% completed
36: 90% completed
32: n_time_step: 554 time: 5.53 n_dofs (thermal) after cell activation: 1218
36: 100% completed
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Leaving test case "integration_3D_amr_device"; testing time: 102900549us
36: Leaving test module "Integration_3D_AMR"; testing time: 102901212us
36: 
36: *** No errors detected
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Leaving test case "integration_3D_amr_device"; testing time: 102900284us
36: Leaving test module "Integration_3D_AMR"; testing time: 102900974us
36: 
36: *** No errors detected
36: 
37/48 Test #36: test_integration_3d_amr_device_2 .........   Passed  103.64 sec
test 38
      Start 38: test_integration_da_augmented_2

38: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da_augmented"
38: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
38: Test timeout computed to be: 7200
38: Running 1 test case...
38: Entering test module "Integration_Data_Assimilation_Augmented"
38: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Entering test case "integration_3D_data_assimilation_augmented"
38: Running 1 test case...
38: Entering test module "Integration_Data_Assimilation_Augmented"
38: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Entering test case "integration_3D_data_assimilation_augmented"
38: Reading the experimental log file...
38: Done. Log entries found for 1 camera(s), with 2 frame(s).
38: Starting the main time stepping loop...
38: 10% completed
38: 20% completed
38: 30% completed
38: 40% completed
38: Rank: 1 | Old parameters for member 2: 0.446065 
38: Rank: 1 | Number expt sites mapped to DOFs: 2
38: 50% completed
38: 60% completed
38: 70% completed
38: Performing data assimilation at time 0.04...
38: Rank: 0 | Old parameters for member 0: 0.413453 
38: Rank: 0 | Old parameters for member 1: 0.385362 
38: Rank: 0 | Number expt sites mapped to DOFs: 2
38: Getting the perturbed innovation...
38: Applying the Kalman gain...
38: Updating the ensemble members...
38: Rank: 1 | New parameters for member 2: 0.107206 
38: Done.
38: Rank: 0 | New parameters for member 0: 0.121104 
38: Rank: 0 | New parameters for member 1: 0.142225 
38: 80% completed
38: 90% completed
38: 100% completed
38: 
38: *** No errors detected
38: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Leaving test case "integration_3D_data_assimilation_augmented"; testing time: 38809876us
38: Leaving test module "Integration_Data_Assimilation_Augmented"; testing time: 38810255us
38: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Leaving test case "integration_3D_data_assimilation_augmented"; testing time: 38823128us
38: Leaving test module "Integration_Data_Assimilation_Augmented"; testing time: 38823459us
38: 
38: *** No errors detected
38: 
38/48 Test #38: test_integration_da_augmented_2 ..........   Passed   39.57 sec
test 40
      Start 40: test_integration_thermoelastic_2

40: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic"
40: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
40: Test timeout computed to be: 7200
40: Running 2 test cases...
40: Entering test module "Integration_Thermoelastic"
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(19): Entering test case "integration_thermoelastic"
40: Running 2 test cases...
40: Entering test module "Integration_Thermoelastic"
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(19): Entering test case "integration_thermoelastic"
32: n_time_step: 577 time: 5.76 n_dofs (thermal) after cell activation: 1219
32: n_time_step: 601 time: 6 n_dofs (thermal) after cell activation: 1220
32: 60% completed
39: 40% completed
31: 20% completed
32: n_time_step: 624 time: 6.23 n_dofs (thermal) after cell activation: 1221
32: n_time_step: 647 time: 6.46 n_dofs (thermal) after cell activation: 1222
34/48 Test #31: test_integration_3d_1 ....................***Timeout 7200.05 sec
32: n_time_step: 671 time: 6.7 n_dofs (thermal) after cell activation: 1223
32: n_time_step: 694 time: 6.93 n_dofs (thermal) after cell activation: 1224
32: 70% completed
32: n_time_step: 717 time: 7.16 n_dofs (thermal) after cell activation: 1226
32: n_time_step: 740 time: 7.39 n_dofs (thermal) after cell activation: 1227
32: 50% completed
32: n_time_step: 763 time: 7.62 n_dofs (thermal) after cell activation: 1228
32: n_time_step: 787 time: 7.86 n_dofs (thermal) after cell activation: 1229
40: 10% completed
32: 80% completed
32: n_time_step: 810 time: 8.09 n_dofs (thermal) after cell activation: 1230
32: n_time_step: 833 time: 8.32 n_dofs (thermal) after cell activation: 1231
39/48 Test #32: test_integration_3d_2 ....................***Timeout 7200.03 sec
test 42
      Start 42: test_material_deposition_2

42: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_material_deposition"
42: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
42: Test timeout computed to be: 7200
42: Running 11 test cases...
42: Entering test module "MaterialDeposition"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Entering test case "read_material_deposition_file_2d"
42: Running 11 test cases...
42: Entering test module "MaterialDeposition"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Entering test case "read_material_deposition_file_2d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Leaving test case "read_material_deposition_file_2d"; testing time: 299us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Entering test case "read_material_deposition_file_3d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Leaving test case "read_material_deposition_file_3d"; testing time: 171us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(134): Test case "get_elements_to_activate_2d" is skipped because precondition failed: the test only works in serial
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(195): Test case "get_elements_to_activate_3d" is skipped because precondition failed: the test only works in serial
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Entering test case "material_deposition"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Leaving test case "read_material_deposition_file_2d"; testing time: 367us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Entering test case "read_material_deposition_file_3d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Leaving test case "read_material_deposition_file_3d"; testing time: 203us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(134): Test case "get_elements_to_activate_2d" is skipped because precondition failed: the test only works in serial
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(195): Test case "get_elements_to_activate_3d" is skipped because precondition failed: the test only works in serial
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Entering test case "material_deposition"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Leaving test case "material_deposition"; testing time: 10907384us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Entering test case "deposition_from_scan_path_2d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Leaving test case "deposition_from_scan_path_2d"; testing time: 314us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Entering test case "deposition_from_scan_path_3d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Leaving test case "deposition_from_scan_path_3d"; testing time: 179us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Entering test case "deposition_from_L_scan_path_3d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Leaving test case "deposition_from_L_scan_path_3d"; testing time: 228us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Entering test case "deposition_from_diagonal_scan_path_3d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Leaving test case "deposition_from_diagonal_scan_path_3d"; testing time: 169us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Entering test case "merge_multiple_deposition_paths"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Leaving test case "merge_multiple_deposition_paths"; testing time: 111us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Entering test case "deposition_quaternion_straight_line"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Leaving test case "deposition_quaternion_straight_line"; testing time: 581us
42: Leaving test module "MaterialDeposition"; testing time: 10911241us
42: 
42: *** No errors detected
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Leaving test case "material_deposition"; testing time: 10916326us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Entering test case "deposition_from_scan_path_2d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Leaving test case "deposition_from_scan_path_2d"; testing time: 244us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Entering test case "deposition_from_scan_path_3d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Leaving test case "deposition_from_scan_path_3d"; testing time: 205us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Entering test case "deposition_from_L_scan_path_3d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Leaving test case "deposition_from_L_scan_path_3d"; testing time: 192us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Entering test case "deposition_from_diagonal_scan_path_3d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Leaving test case "deposition_from_diagonal_scan_path_3d"; testing time: 164us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Entering test case "merge_multiple_deposition_paths"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Leaving test case "merge_multiple_deposition_paths"; testing time: 122us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Entering test case "deposition_quaternion_straight_line"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Leaving test case "deposition_quaternion_straight_line"; testing time: 505us
42: Leaving test module "MaterialDeposition"; testing time: 10919821us
42: 
42: *** No errors detected
42: 
40/48 Test #42: test_material_deposition_2 ...............   Passed   11.69 sec
test 44
      Start 44: test_microstructure_2

44: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_microstructure"
44: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
44: Test timeout computed to be: 7200
44: Running 1 test case...
44: Entering test module "MicroStructure"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Entering test case "G_and_R"
44: Running 1 test case...
44: Entering test module "MicroStructure"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Entering test case "G_and_R"
44: Test case G_and_R did not check any assertions
44: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Leaving test case "G_and_R"; testing time: 272195us
44: Leaving test module "MicroStructure"; testing time: 272271us
44: 
44: *** No errors detected
44: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Leaving test case "G_and_R"; testing time: 270792us
44: Leaving test module "MicroStructure"; testing time: 283549us
44: 
44: *** No errors detected
44: 
41/48 Test #44: test_microstructure_2 ....................   Passed    1.03 sec
test 46
      Start 46: test_thermal_physics_2

46: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_physics"
46: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
46: Test timeout computed to be: 7200
46: Running 7 test cases...
46: Entering test module "ThermalPhysics"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Entering test case "thermal_2d_explicit_host"
46: Running 7 test cases...
46: Entering test module "ThermalPhysics"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Entering test case "thermal_2d_explicit_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Leaving test case "thermal_2d_explicit_host"; testing time: 212156us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Entering test case "thermal_2d_manufactured_solution_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Leaving test case "thermal_2d_explicit_host"; testing time: 212236us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Entering test case "thermal_2d_manufactured_solution_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Leaving test case "thermal_2d_manufactured_solution_host"; testing time: 148662us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Entering test case "initial_temperature_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Leaving test case "thermal_2d_manufactured_solution_host"; testing time: 148386us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Entering test case "initial_temperature_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Leaving test case "initial_temperature_host"; testing time: 162624us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Entering test case "energy_conservation_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Leaving test case "initial_temperature_host"; testing time: 162793us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Entering test case "energy_conservation_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Leaving test case "energy_conservation_host"; testing time: 7006018us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Leaving test case "energy_conservation_host"; testing time: 6993023us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Entering test case "radiation_bcs_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Entering test case "radiation_bcs_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Leaving test case "radiation_bcs_host"; testing time: 4194403us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Leaving test case "radiation_bcs_host"; testing time: 4206522us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Entering test case "convection_bcs_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Entering test case "convection_bcs_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Leaving test case "convection_bcs_host"; testing time: 47198301us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Entering test case "reference_temperature_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Leaving test case "convection_bcs_host"; testing time: 47198572us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Entering test case "reference_temperature_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Leaving test case "reference_temperature_host"; testing time: 171111us
46: Leaving test module "ThermalPhysics"; testing time: 59106327us
46: 
46: *** No errors detected
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Leaving test case "reference_temperature_host"; testing time: 177129us
46: Leaving test module "ThermalPhysics"; testing time: 59125022us
46: 
46: *** No errors detected
46: 
42/48 Test #46: test_thermal_physics_2 ...................   Passed   59.86 sec
test 48
      Start 48: test_ensemble_management_2

48: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_ensemble_management"
48: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
48: Test timeout computed to be: 7200
48: Running 1 test case...
48: Entering test module "EnsembleManagement"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Entering test case "database_ensemble"
48: Running 1 test case...
48: Entering test module "EnsembleManagement"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Entering test case "database_ensemble"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Leaving test case "database_ensemble"; testing time: 362us
48: Leaving test module "EnsembleManagement"; testing time: 393us
48: 
48: *** No errors detected
48: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Leaving test case "database_ensemble"; testing time: 2510us
48: Leaving test module "EnsembleManagement"; testing time: 2542us
48: 
48: *** No errors detected
48: 
43/48 Test #48: test_ensemble_management_2 ...............   Passed    0.72 sec
40: 20% completed
35/48 Test #39: test_integration_thermoelastic_1 .........***Timeout 7200.09 sec
test 34
      Start 34: test_integration_3d_amr_2

34: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_amr"
34: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
34: Test timeout computed to be: 7200
34: Running 2 test cases...
34: Entering test module "Integration_3D_AMR"
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Entering test case "integration_3D_amr"
34: Running 2 test cases...
34: Entering test module "Integration_3D_AMR"
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Entering test case "integration_3D_amr"
34: 10% completed
34: 20% completed
34: 30% completed
34: 40% completed
34: 50% completed
34: 60% completed
34: 70% completed
34: 80% completed
34: 90% completed
34: 100% completed
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Leaving test case "integration_3D_amr"; testing time: 15030112us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Entering test case "integration_3D_amr_refine_coarsen"
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Leaving test case "integration_3D_amr"; testing time: 15065649us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Entering test case "integration_3D_amr_refine_coarsen"
32: 60% completed
34: 10% completed
34: 20% completed
34: 30% completed
34: 40% completed
40: 30% completed
34: 50% completed
34: 60% completed
34: 70% completed
34: 80% completed
34: 90% completed
34: 100% completed
34: 
34: *** No errors detected
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Leaving test case "integration_3D_amr_refine_coarsen"; testing time: 145099060us
34: Leaving test module "Integration_3D_AMR"; testing time: 160130836us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Leaving test case "integration_3D_amr_refine_coarsen"; testing time: 145099007us
34: Leaving test module "Integration_3D_AMR"; testing time: 160166673us
34: 
34: *** No errors detected
34: 
36/48 Test #34: test_integration_3d_amr_2 ................   Passed  168.51 sec
test 36
      Start 36: test_integration_3d_amr_device_2

36: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_amr_device"
36: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
36: Test timeout computed to be: 7200
36: Running 1 test case...
36: Entering test module "Integration_3D_AMR"
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Entering test case "integration_3D_amr_device"
36: Running 1 test case...
36: Entering test module "Integration_3D_AMR"
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Entering test case "integration_3D_amr_device"
36: 10% completed
36: 20% completed
36: 30% completed
36: 40% completed
36: 50% completed
36: 60% completed
36: 70% completed
40: 40% completed
36: 80% completed
36: 90% completed
36: 100% completed
36: 
36: *** No errors detected
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Leaving test case "integration_3D_amr_device"; testing time: 118864341us
36: Leaving test module "Integration_3D_AMR"; testing time: 118864660us
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Leaving test case "integration_3D_amr_device"; testing time: 118944930us
36: Leaving test module "Integration_3D_AMR"; testing time: 118945320us
36: 
36: *** No errors detected
36: 
37/48 Test #36: test_integration_3d_amr_device_2 .........   Passed  127.54 sec
test 38
      Start 38: test_integration_da_augmented_2

38: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da_augmented"
38: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
38: Test timeout computed to be: 7200
38: Running 1 test case...
38: Entering test module "Integration_Data_Assimilation_Augmented"
38: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Entering test case "integration_3D_data_assimilation_augmented"
38: Running 1 test case...
38: Entering test module "Integration_Data_Assimilation_Augmented"
38: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Entering test case "integration_3D_data_assimilation_augmented"
38: Reading the experimental log file...
38: Done. Log entries found for 1 camera(s), with 2 frame(s).
38: Starting the main time stepping loop...
38: 10% completed
38: 20% completed
38: 30% completed
38: Rank: 1 | Old parameters for member 2: 0.446065 
38: Rank: 1 | Number expt sites mapped to DOFs: 2
38: 40% completed
38: 50% completed
38: 60% completed
38: 70% completed
38: Performing data assimilation at time 0.04...
38: Rank: 0 | Old parameters for member 0: 0.413453 
38: Rank: 0 | Old parameters for member 1: 0.385362 
38: Rank: 0 | Number expt sites mapped to DOFs: 2
38: Getting the perturbed innovation...
38: Applying the Kalman gain...
38: Updating the ensemble members...
38: Rank: 1 | New parameters for member 2: 0.107206 
38: Done.
38: Rank: 0 | New parameters for member 0: 0.121104 
38: Rank: 0 | New parameters for member 1: 0.142225 
38: 80% completed
38: 90% completed
38: 100% completed
38: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Leaving test case "integration_3D_data_assimilation_augmented"; testing time: 72903846us
38: Leaving test module "Integration_Data_Assimilation_Augmented"; testing time: 72904198us
38: 
38: *** No errors detected
38: 
38: *** No errors detected
38: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Leaving test case "integration_3D_data_assimilation_augmented"; testing time: 72842208us
38: Leaving test module "Integration_Data_Assimilation_Augmented"; testing time: 72842651us
38: 
38/48 Test #38: test_integration_da_augmented_2 ..........   Passed   80.26 sec
test 40
      Start 40: test_integration_thermoelastic_2

40: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic"
40: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
40: Test timeout computed to be: 7200
40: Running 2 test cases...
40: Entering test module "Integration_Thermoelastic"
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(19): Entering test case "integration_thermoelastic"
40: Running 2 test cases...
40: Entering test module "Integration_Thermoelastic"
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(19): Entering test case "integration_thermoelastic"
40: 50% completed
40: 60% completed
32: 70% completed
40: 70% completed
40: 80% completed
32: 80% completed
40: 90% completed
40: 10% completed
40: 100% completed
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(19): Leaving test case "integration_thermoelastic"; testing time: 1926512175us
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(47): Entering test case "integration_thermoelastic_add_material"
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(19): Leaving test case "integration_thermoelastic"; testing time: 1926512038us
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(47): Entering test case "integration_thermoelastic_add_material"
39/48 Test #32: test_integration_3d_2 ....................***Timeout 7200.11 sec
test 42
      Start 42: test_material_deposition_2

42: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_material_deposition"
42: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
42: Test timeout computed to be: 7200
40: 10% completed
42: Running 11 test cases...
42: Entering test module "MaterialDeposition"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Entering test case "read_material_deposition_file_2d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Leaving test case "read_material_deposition_file_2d"; testing time: 382us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Entering test case "read_material_deposition_file_3d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Leaving test case "read_material_deposition_file_3d"; testing time: 241us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(134): Test case "get_elements_to_activate_2d" is skipped because precondition failed: the test only works in serial
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(195): Test case "get_elements_to_activate_3d" is skipped because precondition failed: the test only works in serial
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Entering test case "material_deposition"
42: Running 11 test cases...
42: Entering test module "MaterialDeposition"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Entering test case "read_material_deposition_file_2d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Leaving test case "read_material_deposition_file_2d"; testing time: 371us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Entering test case "read_material_deposition_file_3d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Leaving test case "read_material_deposition_file_3d"; testing time: 216us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(134): Test case "get_elements_to_activate_2d" is skipped because precondition failed: the test only works in serial
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(195): Test case "get_elements_to_activate_3d" is skipped because precondition failed: the test only works in serial
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Entering test case "material_deposition"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Leaving test case "material_deposition"; testing time: 16989821us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Entering test case "deposition_from_scan_path_2d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Leaving test case "material_deposition"; testing time: 16923037us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Entering test case "deposition_from_scan_path_2d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Leaving test case "deposition_from_scan_path_2d"; testing time: 298us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Entering test case "deposition_from_scan_path_3d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Leaving test case "deposition_from_scan_path_2d"; testing time: 297us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Entering test case "deposition_from_scan_path_3d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Leaving test case "deposition_from_scan_path_3d"; testing time: 239us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Entering test case "deposition_from_L_scan_path_3d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Leaving test case "deposition_from_scan_path_3d"; testing time: 239us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Entering test case "deposition_from_L_scan_path_3d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Leaving test case "deposition_from_L_scan_path_3d"; testing time: 258us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Entering test case "deposition_from_diagonal_scan_path_3d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Leaving test case "deposition_from_L_scan_path_3d"; testing time: 255us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Entering test case "deposition_from_diagonal_scan_path_3d"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Leaving test case "deposition_from_diagonal_scan_path_3d"; testing time: 217us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Entering test case "merge_multiple_deposition_paths"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Leaving test case "deposition_from_diagonal_scan_path_3d"; testing time: 228us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Entering test case "merge_multiple_deposition_paths"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Leaving test case "merge_multiple_deposition_paths"; testing time: 135us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Entering test case "deposition_quaternion_straight_line"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Leaving test case "merge_multiple_deposition_paths"; testing time: 134us
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Entering test case "deposition_quaternion_straight_line"
42: 
42: *** No errors detected
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Leaving test case "deposition_quaternion_straight_line"; testing time: 678us
42: Leaving test module "MaterialDeposition"; testing time: 16994191us
42: 
42: *** No errors detected
42: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Leaving test case "deposition_quaternion_straight_line"; testing time: 663us
42: Leaving test module "MaterialDeposition"; testing time: 16927375us
42: 
40/48 Test #42: test_material_deposition_2 ...............   Passed   23.44 sec
test 44
      Start 44: test_microstructure_2

44: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_microstructure"
44: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
44: Test timeout computed to be: 7200
44: Running 1 test case...
44: Entering test module "MicroStructure"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Entering test case "G_and_R"
44: Running 1 test case...
44: Entering test module "MicroStructure"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Entering test case "G_and_R"
44: 
44: *** No errors detected
44: Test case G_and_R did not check any assertions
44: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Leaving test case "G_and_R"; testing time: 367207us
44: Leaving test module "MicroStructure"; testing time: 367280us
44: 
44: *** No errors detected
44: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Leaving test case "G_and_R"; testing time: 452828us
44: Leaving test module "MicroStructure"; testing time: 452870us
44: 
41/48 Test #44: test_microstructure_2 ....................   Passed    7.51 sec
test 46
      Start 46: test_thermal_physics_2

46: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_physics"
46: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
46: Test timeout computed to be: 7200
46: Running 7 test cases...
46: Entering test module "ThermalPhysics"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Entering test case "thermal_2d_explicit_host"
46: Running 7 test cases...
46: Entering test module "ThermalPhysics"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Entering test case "thermal_2d_explicit_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Leaving test case "thermal_2d_explicit_host"; testing time: 271512us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Entering test case "thermal_2d_manufactured_solution_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Leaving test case "thermal_2d_explicit_host"; testing time: 309680us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Entering test case "thermal_2d_manufactured_solution_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Leaving test case "thermal_2d_manufactured_solution_host"; testing time: 243884us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Entering test case "initial_temperature_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Leaving test case "thermal_2d_manufactured_solution_host"; testing time: 243958us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Entering test case "initial_temperature_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Leaving test case "initial_temperature_host"; testing time: 207692us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Entering test case "energy_conservation_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Leaving test case "initial_temperature_host"; testing time: 207693us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Entering test case "energy_conservation_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Leaving test case "energy_conservation_host"; testing time: 9024680us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Entering test case "radiation_bcs_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Leaving test case "energy_conservation_host"; testing time: 9035418us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Entering test case "radiation_bcs_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Leaving test case "radiation_bcs_host"; testing time: 4120457us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Entering test case "convection_bcs_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Leaving test case "radiation_bcs_host"; testing time: 4109766us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Entering test case "convection_bcs_host"
40: 20% completed
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Leaving test case "convection_bcs_host"; testing time: 75122867us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Entering test case "reference_temperature_host"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Leaving test case "convection_bcs_host"; testing time: 75122877us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Entering test case "reference_temperature_host"
46: 
46: *** No errors detected
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Leaving test case "reference_temperature_host"; testing time: 216153us
46: Leaving test module "ThermalPhysics"; testing time: 89208359us
46: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Leaving test case "reference_temperature_host"; testing time: 259690us
46: Leaving test module "ThermalPhysics"; testing time: 89289960us
46: 
46: *** No errors detected
46: 
42/48 Test #46: test_thermal_physics_2 ...................   Passed   96.09 sec
test 48
      Start 48: test_ensemble_management_2

48: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_ensemble_management"
48: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
48: Test timeout computed to be: 7200
48: Running 1 test case...
48: Entering test module "EnsembleManagement"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Entering test case "database_ensemble"
48: 
48: *** No errors detected
48: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Leaving test case "database_ensemble"; testing time: 426us
48: Leaving test module "EnsembleManagement"; testing time: 453us
48: Running 1 test case...
48: Entering test module "EnsembleManagement"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Entering test case "database_ensemble"
48: 
48: *** No errors detected
48: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Leaving test case "database_ensemble"; testing time: 69748us
48: Leaving test module "EnsembleManagement"; testing time: 69783us
48: 
43/48 Test #48: test_ensemble_management_2 ...............   Passed    6.98 sec
40: 30% completed
40: 20% completed
40: 40% completed
40: 50% completed
40: 60% completed
40: 30% completed
40: 70% completed
40: 80% completed
40: 40% completed
40: 90% completed
40: 100% completed
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(47): Leaving test case "integration_thermoelastic_add_material"; testing time: 958253687us
40: Leaving test module "Integration_Thermoelastic"; testing time: 2884767393us
40: 
40: *** No errors detected
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(47): Leaving test case "integration_thermoelastic_add_material"; testing time: 958253515us
40: Leaving test module "Integration_Thermoelastic"; testing time: 2884767271us
40: 
40: *** No errors detected
40: 
44/48 Test #40: test_integration_thermoelastic_2 .........   Passed  2885.52 sec
test 3
      Start  3: test_integration_da_3

3: Test command: /usr/bin/mpiexec "-n" "3" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da"
3: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
3: Test timeout computed to be: 7200
3: Running 3 test cases...
3: Entering test module "Integration_Data_Assimilation"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
3: Running 3 test cases...
3: Running 3 test cases...
3: Entering test module "Integration_Data_Assimilation"
3: Entering test module "Integration_Data_Assimilation"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Starting the main time stepping loop...
3: 10% completed
3: 20% completed
3: 30% completed
3: 40% completed
3: Rank: 2 | Old parameters for member 2: 
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Rank: 1 | Old parameters for member 1: 
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 50% completed
3: 60% completed
3: Rank: 1 | Old parameters for member 1: 
3: Rank: 2 | Old parameters for member 2: 
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 70% completed
3: 80% completed
3: 90% completed
3: 100% completed
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: 10% completed
3: 10% completed
3: 10% completed
3: 20% completed
3: 20% completed
3: 20% completed
3: 30% completed
3: 30% completed
3: 30% completed
3: 40% completed
3: 40% completed
3: 40% completed
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: Updating the ensemble members...
3: Updating the ensemble members...
3: Done.
3: Done.
3: 50% completed
3: 50% completed
3: 50% completed
3: 60% completed
3: 60% completed
3: 60% completed
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: Updating the ensemble members...
3: Done.
3: Updating the ensemble members...
3: Done.
3: 70% completed
3: 70% completed
3: 70% completed
3: 80% completed
3: 80% completed
3: 80% completed
3: 90% completed
3: 90% completed
3: 90% completed
3: 100% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 40471640us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 40540874us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 40742106us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: 10% completed
3: 20% completed
3: 30% completed
3: 40% completed
3: 50% completed
3: Rank: 2 | Old parameters for member 2: 
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Rank: 1 | Old parameters for member 1: 
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: 70% completed
3: 80% completed
3: 90% completed
3: 100% completed
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: 10% completed
3: 10% completed
3: 10% completed
3: 20% completed
3: 20% completed
3: 20% completed
3: 30% completed
3: 30% completed
3: 30% completed
3: 40% completed
3: 40% completed
3: 40% completed
3: 50% completed
3: 50% completed
3: 50% completed
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: 70% completed
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: 80% completed
3: 70% completed
3: 70% completed
3: 80% completed
3: 90% completed
3: 80% completed
3: 90% completed
3: 90% completed
3: 100% completed
3: 100% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 1973200us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 1722163us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 1935659us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: 10% completed
3: 20% completed
3: 30% completed
3: 40% completed
3: 50% completed
3: Rank: 1 | Old parameters for member 1: 
3: Rank: 2 | Old parameters for member 2: 
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: 70% completed
3: 80% completed
3: 90% completed
3: 100% completed
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: 10% completed
3: 10% completed
3: 10% completed
3: 20% completed
3: 20% completed
3: 20% completed
3: 30% completed
3: 30% completed
3: 30% completed
3: 40% completed
3: 40% completed
3: 40% completed
3: 50% completed
3: 50% completed
3: 50% completed
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.12...
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: 70% completed
3: 70% completed
3: 70% completed
3: 80% completed
3: 90% completed
3: 80% completed
3: 80% completed
3: 90% completed
3: 90% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 1725379us
3: Leaving test module "Integration_Data_Assimilation"; testing time: 44189839us
3: 
3: *** No errors detected
3: 100% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 1761618us
3: Leaving test module "Integration_Data_Assimilation"; testing time: 44238355us
3: 
3: *** No errors detected
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 1797107us
3: Leaving test module "Integration_Data_Assimilation"; testing time: 44242107us
3: 
3: *** No errors detected
3: 
45/48 Test  #3: test_integration_da_3 ....................   Passed   44.88 sec
test 4
      Start  4: test_integration_da_6

4: Test command: /usr/bin/mpiexec "-n" "6" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da"
4: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
4: Test timeout computed to be: 7200
4: Running 3 test cases...
4: Running 3 test cases...
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Running 3 test cases...
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Entering test module "Integration_Data_Assimilation"
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Starting the main time stepping loop...
4: 10% completed
4: 20% completed
4: 30% completed
4: 40% completed
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 2 | Old parameters for member 1: 
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 1 | Old parameters for member 0: 
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 50% completed
4: 60% completed
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 2 | Old parameters for member 1: 
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 1 | Old parameters for member 0: 
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 70% completed
4: 80% completed
4: 90% completed
4: 100% completed
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Done.
4: Done.
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Done.
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 100% completed
4: 100% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 37381401us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 37421753us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 37427409us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 37491374us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 37698689us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 37739979us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: 10% completed
4: 20% completed
4: 30% completed
4: 40% completed
4: 50% completed
4: Rank: 2 | Old parameters for member 1: 
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 5 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 1 | Old parameters for member 0: 
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: 80% completed
4: 90% completed
4: 100% completed
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 30% completed
4: 20% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 40% completed
4: 30% completed
4: 30% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 50% completed
4: 40% completed
4: 40% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: 50% completed
4: 50% completed
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.12...
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: 70% completed
4: 70% completed
4: Done.
4: 60% completed
4: 70% completed
4: 80% completed
4: 70% completed
4: 70% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 90% completed
4: 90% completed
4: 80% completed
4: 80% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 1948587us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2079697us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2063273us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 1794563us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2083540us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 1767135us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: 10% completed
4: 20% completed
4: 30% completed
4: 40% completed
4: 50% completed
4: Performing data assimilation at time 0.12...
4: Rank: 1 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 2 | Old parameters for member 1: 
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: 80% completed
4: 90% completed
4: 100% completed
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 20% completed
4: 10% completed
4: 10% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 30% completed
4: 20% completed
4: 20% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 40% completed
4: 30% completed
4: 30% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 50% completed
4: 40% completed
4: 40% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 80% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 90% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 1717510us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 41211058us
4: 
4: *** No errors detected
4: 100% completed
4: 100% completed
4: 100% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 1760496us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 41251447us
4: 
4: *** No errors detected
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 1746531us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 41252041us
4: 
4: *** No errors detected
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 1834259us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 41274467us
4: 
4: *** No errors detected
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 1820839us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 41282159us
4: 
4: *** No errors detected
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 1778386us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 41285769us
4: 
4: *** No errors detected
4: 
46/48 Test  #4: test_integration_da_6 ....................   Passed   41.99 sec
test 7
      Start  7: test_closest_source_point_adaptation_3

7: Test command: /usr/bin/mpiexec "-n" "3" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_closest_source_point_adaptation"
7: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
7: Test timeout computed to be: 7200
7: Running 1 test case...
7: Running 1 test case...
7: Entering test module "ClosestSourcePointAdaptation"
7: Entering test module "ClosestSourcePointAdaptation"
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
7: Running 1 test case...
7: Entering test module "ClosestSourcePointAdaptation"
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
40: 50% completed
7: 
7: *** No errors detected
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 5698201us
7: Leaving test module "ClosestSourcePointAdaptation"; testing time: 5698261us
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 5698555us
7: Leaving test module "ClosestSourcePointAdaptation"; testing time: 5698601us
7: 
7: *** No errors detected
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 5698773us
7: Leaving test module "ClosestSourcePointAdaptation"; testing time: 5698864us
7: 
7: *** No errors detected
7: 
47/48 Test  #7: test_closest_source_point_adaptation_3 ...   Passed    6.33 sec
test 8
      Start  8: test_closest_source_point_adaptation_6

8: Test command: /usr/bin/mpiexec "-n" "6" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_closest_source_point_adaptation"
8: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
8: Test timeout computed to be: 7200
8: Running 1 test case...
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Running 1 test case...
8: Running 1 test case...
8: Running 1 test case...
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Entering test module "ClosestSourcePointAdaptation"
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 3562314us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 3562480us
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 3562785us
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 3562838us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 3562885us
8: 
8: *** No errors detected
8: 
8: *** No errors detected
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 3562912us
8: 
8: *** No errors detected
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 3562931us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 3563027us
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 3562989us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 3563078us
8: 
8: 
8: *** No errors detected
8: *** No errors detected
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 3563322us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 3563424us
8: 
8: *** No errors detected
8: 
48/48 Test  #8: test_closest_source_point_adaptation_6 ...   Passed    4.24 sec

The following tests passed:
	test_closest_source_point_adaptation_1
	test_data_assimilator_1
	test_experimental_data_1
	test_geometry_1
	test_heat_source_1
	test_integration_da_2
	test_closest_source_point_adaptation_2
	test_material_property_device_1
	test_material_property_1
	test_integration_da_1
	test_post_processor_1
	test_quaternion_1
	test_scan_path_1
	test_thermal_operator_1
	test_thermal_operator_device_1
	test_mechanical_operator_1
	test_timer_1
	test_utils_1
	test_validate_input_database_1
	test_integration_2d_1
	test_integration_2d_device_1
	test_thermal_physics_device_1
	test_mechanical_physics_1
	test_integration_3d_amr_1
	test_integration_3d_amr_device_1
	test_integration_da_augmented_1
	test_material_deposition_1
	test_microstructure_1
	test_thermal_physics_1
	test_ensemble_management_1
	test_integration_3d_device_1
	test_integration_2d_2
	test_integration_2d_device_2
	test_integration_3d_amr_2
	test_integration_3d_amr_device_2
	test_integration_da_augmented_2
	test_material_deposition_2
	test_microstructure_2
	test_thermal_physics_2
	test_ensemble_management_2
	test_integration_thermoelastic_2
	test_integration_da_3
	test_integration_da_6
	test_closest_source_point_adaptation_3
	test_closest_source_point_adaptation_6

94% tests passed, 3 tests failed out of 48

Total Test time (real) = 11175.54 sec

The following tests FAILED:
	 31 - test_integration_3d_1 (Timeout)
	 32 - test_integration_3d_2 (Timeout)
	 39 - test_integration_thermoelastic_1 (Timeout)
Errors while running CTest
Output from these tests are in: /var/jenkins/workspace/adamantine-nightly/build/Testing/Temporary/LastTest.log
Use "--rerun-failed --output-on-failure" to re-run the failed cases verbosely.
[Pipeline] }
[Pipeline] // dir
Post stage
[Pipeline] xunit
INFO: Processing CTest-Version 3.x (default)
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
$ docker stop --time=1 c517d8a10df34a789147f56c47e6699cdf0c9c1eed045a207c979ccf52aae99e
INFO: [CTest-Version 3.x (default)] - 1 test report file(s) were found with the pattern 'build/Testing/**/Test.xml' relative to '/var/jenkins/workspace/adamantine-nightly' for the testing framework 'CTest-Version 3.x (default)'.
$ docker rm -f --volumes c517d8a10df34a789147f56c47e6699cdf0c9c1eed045a207c979ccf52aae99e
[Pipeline] // withDockerContainer
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
Failed in branch CPU
40: 60% completed
40: 70% completed
40: 80% completed
40: 90% completed
40: 100% completed
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(19): Leaving test case "integration_thermoelastic"; testing time: 2907702096us
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(47): Entering test case "integration_thermoelastic_add_material"
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(19): Leaving test case "integration_thermoelastic"; testing time: 2907632847us
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(47): Entering test case "integration_thermoelastic_add_material"
40: 10% completed
40: 20% completed
40: 30% completed
40: 40% completed
40: 50% completed
40: 60% completed
40: 70% completed
40: 80% completed
40: 90% completed
40: 100% completed
40: 
40: *** No errors detected
40: 
40: *** No errors detected
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(47): Leaving test case "integration_thermoelastic_add_material"; testing time: 1563771957us
40: Leaving test module "Integration_Thermoelastic"; testing time: 4471476618us
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(47): Leaving test case "integration_thermoelastic_add_material"; testing time: 1563771541us
40: Leaving test module "Integration_Thermoelastic"; testing time: 4471407433us
40: 
44/48 Test #40: test_integration_thermoelastic_2 .........   Passed  4478.80 sec
test 3
      Start  3: test_integration_da_3

3: Test command: /usr/bin/mpiexec "-n" "3" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da"
3: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
3: Test timeout computed to be: 7200
3: Running 3 test cases...
3: Entering test module "Integration_Data_Assimilation"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
3: Running 3 test cases...
3: Entering test module "Integration_Data_Assimilation"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
3: Running 3 test cases...
3: Entering test module "Integration_Data_Assimilation"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Starting the main time stepping loop...
3: 10% completed
3: 20% completed
3: 30% completed
3: 40% completed
3: Rank: 1 | Old parameters for member 1: 
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 2 | Old parameters for member 2: 
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 50% completed
3: 60% completed
3: Rank: 2 | Old parameters for member 2: 
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Rank: 1 | Old parameters for member 1: 
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 70% completed
3: 80% completed
3: 90% completed
3: 100% completed
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: 10% completed
3: 10% completed
3: 10% completed
3: 20% completed
3: 20% completed
3: 20% completed
3: 30% completed
3: 30% completed
3: 30% completed
3: 40% completed
3: 40% completed
3: 40% completed
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: Updating the ensemble members...
3: Done.
3: Updating the ensemble members...
3: Done.
3: 50% completed
3: 50% completed
3: 50% completed
3: 60% completed
3: 60% completed
3: 60% completed
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: Updating the ensemble members...
3: Done.
3: Updating the ensemble members...
3: Done.
3: 70% completed
3: 70% completed
3: 70% completed
3: 80% completed
3: 80% completed
3: 80% completed
3: 90% completed
3: 90% completed
3: 90% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 63057558us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 63377940us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 63853039us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: 10% completed
3: 20% completed
3: 30% completed
3: 40% completed
3: 50% completed
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 2 | Old parameters for member 2: 
3: Rank: 1 | Old parameters for member 1: 
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: 70% completed
3: 80% completed
3: 90% completed
3: 100% completed
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: 10% completed
3: 10% completed
3: 10% completed
3: 20% completed
3: 20% completed
3: 20% completed
3: 30% completed
3: 30% completed
3: 30% completed
3: 40% completed
3: 40% completed
3: 40% completed
3: 50% completed
3: 50% completed
3: 50% completed
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Updating the ensemble members...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Done.
3: 60% completed
3: 70% completed
3: 70% completed
3: 70% completed
3: 80% completed
3: 90% completed
3: 80% completed
3: 80% completed
3: 90% completed
3: 90% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 3169699us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
3: 100% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2890326us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2426732us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: 10% completed
3: 20% completed
3: 30% completed
3: 40% completed
3: 50% completed
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 2 | Old parameters for member 2: 
3: Rank: 1 | Old parameters for member 1: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: 70% completed
3: 80% completed
3: 90% completed
3: 100% completed
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: 10% completed
3: 10% completed
3: 10% completed
3: 20% completed
3: 20% completed
3: 20% completed
3: 30% completed
3: 30% completed
3: 30% completed
3: 40% completed
3: 40% completed
3: 40% completed
3: 50% completed
3: 50% completed
3: 50% completed
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: 70% completed
3: 70% completed
3: 70% completed
3: 80% completed
3: 80% completed
3: 80% completed
3: 90% completed
3: 90% completed
3: 90% completed
3: 100% completed
3: 100% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2506717us
3: Leaving test module "Integration_Data_Assimilation"; testing time: 68734097us
3: 
3: *** No errors detected
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2460907us
3: Leaving test module "Integration_Data_Assimilation"; testing time: 68740827us
3: 
3: *** No errors detected
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2488259us
3: Leaving test module "Integration_Data_Assimilation"; testing time: 68756673us
3: 
3: *** No errors detected
3: 
45/48 Test  #3: test_integration_da_3 ....................   Passed   70.12 sec
test 4
      Start  4: test_integration_da_6

4: Test command: /usr/bin/mpiexec "-n" "6" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da"
4: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
4: Test timeout computed to be: 7200
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Starting the main time stepping loop...
4: 10% completed
4: 20% completed
4: 30% completed
4: 40% completed
4: Rank: 2 | Old parameters for member 1: 
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Old parameters for member 0: 
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 50% completed
4: 60% completed
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Old parameters for member 0: 
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 2 | Old parameters for member 1: 
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 70% completed
4: 80% completed
4: 90% completed
4: 100% completed
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
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4: 20% completed
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4: 30% completed
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4: 30% completed
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4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 100% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58216972us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58263801us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58318287us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58524787us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58927225us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58950309us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: 10% completed
4: 20% completed
4: 30% completed
4: 40% completed
4: 50% completed
4: Rank: 1 | Old parameters for member 0: 
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 2 | Old parameters for member 1: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: 80% completed
4: 90% completed
4: 100% completed
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
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4: 40% completed
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4: 50% completed
4: 40% completed
4: 40% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: 50% completed
4: 50% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Done.
4: 70% completed
4: Done.
4: 60% completed
4: 60% completed
4: 70% completed
4: 80% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 80% completed
4: 90% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 100% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2987348us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 3020798us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: 100% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 3133553us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2416876us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2808448us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2395860us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: 10% completed
4: 20% completed
4: 30% completed
4: 40% completed
4: 50% completed
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 2 | Old parameters for member 1: 
4: Rank: 1 | Old parameters for member 0: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: 80% completed
4: 90% completed
4: 100% completed
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 20% completed
4: 10% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 30% completed
4: 20% completed
4: 20% completed
4: 30% completed
4: 30% completed
4: 40% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 40% completed
4: 40% completed
4: 50% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 50% completed
4: 50% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: 50% completed
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: 50% completed
4: 50% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: 70% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: 80% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 90% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2316967us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 63661216us
4: 
4: *** No errors detected
4: 100% completed
4: 100% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2352582us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 63698883us
4: 
4: *** No errors detected
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2422826us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 63707574us
4: 
4: *** No errors detected
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2433122us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 63738867us
4: 
4: *** No errors detected
4: 
4: *** No errors detected
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2391661us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 63742314us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2388397us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 63721809us
4: 
4: *** No errors detected
4: 
46/48 Test  #4: test_integration_da_6 ....................   Passed   65.62 sec
test 7
      Start  7: test_closest_source_point_adaptation_3

7: Test command: /usr/bin/mpiexec "-n" "3" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_closest_source_point_adaptation"
7: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
7: Test timeout computed to be: 7200
7: Running 1 test case...
7: Entering test module "ClosestSourcePointAdaptation"
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
7: Running 1 test case...
7: Entering test module "ClosestSourcePointAdaptation"
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
7: Running 1 test case...
7: Entering test module "ClosestSourcePointAdaptation"
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
7: 
7: *** No errors detected
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 7148675us
7: Leaving test module "ClosestSourcePointAdaptation"; testing time: 7148729us
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 7146462us
7: Leaving test module "ClosestSourcePointAdaptation"; testing time: 7146524us
7: 
7: *** No errors detected
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 7157623us
7: Leaving test module "ClosestSourcePointAdaptation"; testing time: 7157686us
7: 
7: *** No errors detected
7: 
47/48 Test  #7: test_closest_source_point_adaptation_3 ...   Passed    8.47 sec
test 8
      Start  8: test_closest_source_point_adaptation_6

8: Test command: /usr/bin/mpiexec "-n" "6" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_closest_source_point_adaptation"
8: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
8: Test timeout computed to be: 7200
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4463655us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4463713us
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4465333us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4465381us
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4464538us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4464579us
8: 
8: *** No errors detected
8: 
8: *** No errors detected
8: 
8: *** No errors detected
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4457955us
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4458692us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4458760us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4458025us
8: 
8: *** No errors detected
8: 
8: *** No errors detected
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4459853us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4459923us
8: 
8: *** No errors detected
8: 
48/48 Test  #8: test_closest_source_point_adaptation_6 ...   Passed    6.38 sec

The following tests passed:
	test_closest_source_point_adaptation_1
	test_data_assimilator_1
	test_experimental_data_1
	test_geometry_1
	test_heat_source_1
	test_integration_da_2
	test_closest_source_point_adaptation_2
	test_material_property_device_1
	test_material_property_1
	test_integration_da_1
	test_post_processor_1
	test_quaternion_1
	test_scan_path_1
	test_mechanical_operator_1
	test_thermal_operator_device_1
	test_thermal_operator_1
	test_timer_1
	test_utils_1
	test_validate_input_database_1
	test_integration_2d_1
	test_integration_2d_device_1
	test_mechanical_physics_1
	test_thermal_physics_device_1
	test_integration_3d_amr_device_1
	test_integration_3d_amr_1
	test_integration_da_augmented_1
	test_material_deposition_1
	test_microstructure_1
	test_thermal_physics_1
	test_ensemble_management_1
	test_integration_3d_device_1
	test_integration_2d_2
	test_integration_2d_device_2
	test_integration_3d_amr_2
	test_integration_3d_amr_device_2
	test_integration_da_augmented_2
	test_material_deposition_2
	test_microstructure_2
	test_thermal_physics_2
	test_ensemble_management_2
	test_integration_thermoelastic_2
	test_integration_da_3
	test_integration_da_6
	test_closest_source_point_adaptation_3
	test_closest_source_point_adaptation_6

94% tests passed, 3 tests failed out of 48

Total Test time (real) = 13280.64 sec

The following tests FAILED:
	 31 - test_integration_3d_1 (Timeout)
	 32 - test_integration_3d_2 (Timeout)
	 39 - test_integration_thermoelastic_1 (Timeout)
Errors while running CTest
Output from these tests are in: /var/jenkins/workspace/adamantine-nightly/build/Testing/Temporary/LastTest.log
Use "--rerun-failed --output-on-failure" to re-run the failed cases verbosely.
[Pipeline] }
[Pipeline] // dir
Post stage
[Pipeline] xunit
INFO: Processing CTest-Version 3.x (default)
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
$ docker stop --time=1 3fb79fe638b6fdc712274403d5bdba59c9d7ab4a99656200bbb4334ff2c4fd8f
INFO: [CTest-Version 3.x (default)] - 1 test report file(s) were found with the pattern 'build/Testing/**/Test.xml' relative to '/var/jenkins/workspace/adamantine-nightly' for the testing framework 'CTest-Version 3.x (default)'.
$ docker rm -f --volumes 3fb79fe638b6fdc712274403d5bdba59c9d7ab4a99656200bbb4334ff2c4fd8f
[Pipeline] // withDockerContainer
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
Failed in branch CUDA
[Pipeline] // parallel
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // timeout
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] End of Pipeline
ERROR: script returned exit code 8
Finished: FAILURE