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48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Leaving test case "radiation_bcs_host"; testing time: 2690162us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Entering test case "convection_bcs_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Leaving test case "radiation_bcs_host"; testing time: 2702219us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Entering test case "convection_bcs_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Leaving test case "convection_bcs_host"; testing time: 50919594us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Entering test case "reference_temperature_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Leaving test case "convection_bcs_host"; testing time: 50907195us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Entering test case "reference_temperature_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Leaving test case "reference_temperature_host"; testing time: 124075us
48: Leaving test module "ThermalPhysics"; testing time: 58219368us
48: 
48: *** No errors detected
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Leaving test case "reference_temperature_host"; testing time: 150879us
48: Leaving test module "ThermalPhysics"; testing time: 58245894us
48: 
48: *** No errors detected
48: 
44/50 Test #48: test_thermal_physics_2 ...................   Passed   58.99 sec
test 50
      Start 50: test_ensemble_management_2

50: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_ensemble_management"
50: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
50: Test timeout computed to be: 7200
50: Running 1 test case...
50: Entering test module "EnsembleManagement"
50: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Entering test case "database_ensemble"
50: Running 1 test case...
50: Entering test module "EnsembleManagement"
50: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Entering test case "database_ensemble"
50: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Leaving test case "database_ensemble"; testing time: 344us
50: Leaving test module "EnsembleManagement"; testing time: 373us
50: 
50: *** No errors detected
50: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Leaving test case "database_ensemble"; testing time: 5971us
50: Leaving test module "EnsembleManagement"; testing time: 6004us
50: 
50: *** No errors detected
50: 
45/50 Test #50: test_ensemble_management_2 ...............   Passed    0.75 sec
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34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Leaving test case "integration_3D_five_axis"; testing time: 2225554305us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(117): Entering test case "integration_3D_checkpoint_restart"
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Leaving test case "integration_3D_five_axis"; testing time: 2225351511us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(117): Entering test case "integration_3D_checkpoint_restart"
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34: Checkpoint reached
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34: Restarting from file
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34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(117): Leaving test case "integration_3D_checkpoint_restart"; testing time: 56065220us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(169): Entering test case "hourglass"
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(117): Leaving test case "integration_3D_checkpoint_restart"; testing time: 56065164us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(169): Entering test case "hourglass"
34: 60% completed
34: n_time_step: 1 time: 0 n_dofs (thermal) after mesh refinement: 1172
41: 40% completed
34: n_time_step: 100 time: 0.99 n_dofs (thermal) after cell activation: 1178
34: 10% completed
34: n_time_step: 101 time: 1 n_dofs (thermal) after cell activation: 1178
34: n_time_step: 124 time: 1.23 n_dofs (thermal) after cell activation: 1181
34: n_time_step: 147 time: 1.46 n_dofs (thermal) after cell activation: 1184
34: n_time_step: 170 time: 1.69 n_dofs (thermal) after cell activation: 1187
34: 70% completed
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34: n_time_step: 171 time: 1.7 n_dofs (thermal) after cell activation: 1187
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34: n_time_step: 194 time: 1.93 n_dofs (thermal) after cell activation: 1190
34: 20% completed
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34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Leaving test case "integration_3D_short"; testing time: 1363936771us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Entering test case "integration_3D_five_axis"
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Leaving test case "integration_3D_short"; testing time: 1364079572us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Entering test case "integration_3D_five_axis"
34: n_time_step: 217 time: 2.16 n_dofs (thermal) after cell activation: 1193
34: n_time_step: 241 time: 2.4 n_dofs (thermal) after cell activation: 1196
34: n_time_step: 264 time: 2.63 n_dofs (thermal) after cell activation: 1199
34: n_time_step: 287 time: 2.86 n_dofs (thermal) after cell activation: 1202
34: n_time_step: 301 time: 3 n_dofs (thermal) after cell activation: 1204
34: 30% completed
34: n_time_step: 325 time: 3.24 n_dofs (thermal) after cell activation: 1205
34: n_time_step: 348 time: 3.47 n_dofs (thermal) after cell activation: 1206
37/50 Test #41: test_integration_thermoelastic_1 .........***Timeout 7200.11 sec
test 36
      Start 36: test_integration_3d_amr_2

36: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_amr"
36: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
36: Test timeout computed to be: 7200
36: Running 2 test cases...
36: Entering test module "Integration_3D_AMR"
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Entering test case "integration_3D_amr"
36: Running 2 test cases...
36: Entering test module "Integration_3D_AMR"
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Entering test case "integration_3D_amr"
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36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Leaving test case "integration_3D_amr"; testing time: 14824827us
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Entering test case "integration_3D_amr_refine_coarsen"
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Leaving test case "integration_3D_amr"; testing time: 14883241us
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Entering test case "integration_3D_amr_refine_coarsen"
34: n_time_step: 371 time: 3.7 n_dofs (thermal) after cell activation: 1207
36: 10% completed
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34: n_time_step: 395 time: 3.94 n_dofs (thermal) after cell activation: 1208
34: 40% completed
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34: n_time_step: 418 time: 4.17 n_dofs (thermal) after cell activation: 1209
36: 50% completed
34: n_time_step: 441 time: 4.4 n_dofs (thermal) after cell activation: 1210
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36: 
36: *** No errors detected
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Leaving test case "integration_3D_amr_refine_coarsen"; testing time: 144976919us
36: Leaving test module "Integration_3D_AMR"; testing time: 159802374us
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Leaving test case "integration_3D_amr_refine_coarsen"; testing time: 144976855us
36: Leaving test module "Integration_3D_AMR"; testing time: 159860844us
36: 
36: *** No errors detected
36: 
38/50 Test #36: test_integration_3d_amr_2 ................   Passed  166.11 sec
test 38
      Start 38: test_integration_3d_amr_device_2

38: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_amr_device"
38: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
38: Test timeout computed to be: 7200
34: n_time_step: 465 time: 4.64 n_dofs (thermal) after cell activation: 1211
38: Running 1 test case...
38: Entering test module "Integration_3D_AMR"
38: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Entering test case "integration_3D_amr_device"
38: Running 1 test case...
38: Entering test module "Integration_3D_AMR"
38: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Entering test case "integration_3D_amr_device"
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34: n_time_step: 488 time: 4.87 n_dofs (thermal) after cell activation: 1212
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34: n_time_step: 507 time: 5.06 n_dofs (thermal) after cell activation: 1216
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34: n_time_step: 531 time: 5.3 n_dofs (thermal) after cell activation: 1217
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34: n_time_step: 554 time: 5.53 n_dofs (thermal) after cell activation: 1218
38: 100% completed
38: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Leaving test case "integration_3D_amr_device"; testing time: 125909197us
38: Leaving test module "Integration_3D_AMR"; testing time: 125909532us
38: 
38: *** No errors detected
38: 
38: *** No errors detected
38: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Leaving test case "integration_3D_amr_device"; testing time: 125865176us
38: Leaving test module "Integration_3D_AMR"; testing time: 125865539us
38: 
39/50 Test #38: test_integration_3d_amr_device_2 .........   Passed  134.47 sec
test 40
      Start 40: test_integration_da_augmented_2

40: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da_augmented"
40: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
40: Test timeout computed to be: 7200
40: Running 1 test case...
40: Entering test module "Integration_Data_Assimilation_Augmented"
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Entering test case "integration_3D_data_assimilation_augmented"
40: Running 1 test case...
40: Entering test module "Integration_Data_Assimilation_Augmented"
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Entering test case "integration_3D_data_assimilation_augmented"
40: Reading the experimental log file...
40: Done. Log entries found for 1 camera(s), with 2 frame(s).
40: Starting the main time stepping loop...
40: 10% completed
34: n_time_step: 577 time: 5.76 n_dofs (thermal) after cell activation: 1219
40: 20% completed
40: 30% completed
40: Rank: 1 | Old parameters for member 2: 0.446065 
40: 40% completed
40: Rank: 1 | Number expt sites mapped to DOFs: 2
40: 50% completed
40: 60% completed
40: 70% completed
34: n_time_step: 601 time: 6 n_dofs (thermal) after cell activation: 1220
34: 60% completed
40: Performing data assimilation at time 0.04...
40: Rank: 0 | Old parameters for member 0: 0.413453 
40: Rank: 0 | Old parameters for member 1: 0.385362 
40: Rank: 0 | Number expt sites mapped to DOFs: 2
40: Getting the perturbed innovation...
40: Applying the Kalman gain...
40: Updating the ensemble members...
40: Rank: 1 | New parameters for member 2: 0.107206 
40: Done.
40: Rank: 0 | New parameters for member 0: 0.121104 
40: Rank: 0 | New parameters for member 1: 0.142225 
40: 80% completed
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40: 
40: *** No errors detected
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Leaving test case "integration_3D_data_assimilation_augmented"; testing time: 74795295us
40: Leaving test module "Integration_Data_Assimilation_Augmented"; testing time: 74795652us
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Leaving test case "integration_3D_data_assimilation_augmented"; testing time: 74690448us
40: Leaving test module "Integration_Data_Assimilation_Augmented"; testing time: 74690902us
40: 
40: *** No errors detected
40: 
40/50 Test #40: test_integration_da_augmented_2 ..........   Passed   83.00 sec
test 42
      Start 42: test_integration_thermoelastic_2

42: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic"
42: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
42: Test timeout computed to be: 7200
34: n_time_step: 624 time: 6.23 n_dofs (thermal) after cell activation: 1221
42: Running 2 test cases...
42: Entering test module "Integration_Thermoelastic"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(19): Entering test case "integration_thermoelastic"
42: Running 2 test cases...
42: Entering test module "Integration_Thermoelastic"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(19): Entering test case "integration_thermoelastic"
42: 
42: --------------------------------------------------------
42: An error occurred in line <1581> of file </opt/dealii/include/deal.II/lac/la_parallel_vector.h> in function
42:     Number dealii::LinearAlgebra::distributed::Vector<Number, MemorySpace>::operator()(size_type) const [with Number = double; MemorySpace = dealii::MemorySpace::Host; size_type = long unsigned int]
42: The violated condition was: 
42:     partitioner->in_local_range(global_index) || vector_is_ghosted == true
42: Additional information: 
42:     You tried to read a ghost element of this vector, but it has not
42:     imported its ghost values.
42: 
42: Stacktrace:
42: -----------
42: #0  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: dealii::LinearAlgebra::distributed::Vector<double, dealii::MemorySpace::Host>::operator()(unsigned long) const
42: #1  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: dealii::LinearAlgebra::distributed::Vector<double, dealii::MemorySpace::Host>::operator[](unsigned long) const
42: #2  /opt/dealii/lib/libdeal_II.g.so.9.6.2: dealii::LinearAlgebra::distributed::Vector<double, dealii::MemorySpace::Host>::extract_subvector_to(dealii::ArrayView<unsigned long const, dealii::MemorySpace::Host> const&, dealii::ArrayView<double, dealii::MemorySpace::Host>&) const
42: #3  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: void dealii::DoFCellAccessor<3, 3, false>::get_dof_values<double, double*>(dealii::ReadVector<double> const&, double*, double*) const
42: #4  /opt/dealii/lib/libdeal_II.g.so.9.6.2: void dealii::DoFCellAccessor<3, 3, false>::get_dof_values<dealii::ReadVector<double>, double>(dealii::ReadVector<double> const&, dealii::Vector<double>&) const
42: #5  /opt/dealii/lib/libdeal_II.g.so.9.6.2: void dealii::DoFCellAccessor<3, 3, false>::get_interpolated_dof_values<double>(dealii::ReadVector<double> const&, dealii::Vector<double>&, unsigned short) const
42: #6  /opt/dealii/lib/libdeal_II.g.so.9.6.2: void dealii::FEValuesBase<3, 3>::CellIteratorWrapper::get_interpolated_dof_values<double>(dealii::ReadVector<double> const&, dealii::Vector<double>&) const
42: #7  /opt/dealii/lib/libdeal_II.g.so.9.6.2: void dealii::FEValuesViews::Vector<3, 3>::get_function_symmetric_gradients<double>(dealii::ReadVector<double> const&, std::vector<dealii::ProductType<double, dealii::SymmetricTensor<2, 3, double> >::type, std::allocator<dealii::ProductType<double, dealii::SymmetricTensor<2, 3, double> >::type> >&) const
42: #8  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: adamantine::MechanicalPhysics<3, -1, 3, adamantine::SolidLiquidPowder, dealii::MemorySpace::Host>::evaluate_trial_state(dealii::LinearAlgebra::distributed::Vector<double, dealii::MemorySpace::Host> const&)
42: #9  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: adamantine::MechanicalPhysics<3, -1, 3, adamantine::SolidLiquidPowder, dealii::MemorySpace::Host>::evaluate_residual(dealii::LinearAlgebra::distributed::Vector<double, dealii::MemorySpace::Host> const&)
42: #10  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: adamantine::MechanicalPhysics<3, -1, 3, adamantine::SolidLiquidPowder, dealii::MemorySpace::Host>::solve()
42: #11  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: std::pair<dealii::LinearAlgebra::distributed::Vector<double, dealii::MemorySpace::Host>, dealii::LinearAlgebra::distributed::Vector<double, dealii::MemorySpace::Host> > run<3, -1, 3, adamantine::SolidLiquidPowder, dealii::MemorySpace::Host>(ompi_communicator_t* const&, boost::property_tree::basic_ptree<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::less<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > const&, std::vector<adamantine::Timer, std::allocator<adamantine::Timer> >&)
42: #12  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: integration_thermoelastic::test_method()
42: #13  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: 
42: #14  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: boost::detail::function::void_function_invoker0<void (*)(), void>::invoke(boost::detail::function::function_buffer&)
42: #15  /lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0: 
42: #16  /lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0: boost::execution_monitor::catch_signals(boost::function<int ()> const&)
42: #17  /lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0: boost::execution_monitor::execute(boost::function<int ()> const&)
42: #18  /lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0: boost::execution_monitor::vexecute(boost::function<void ()> const&)
42: #19  /lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0: boost::unit_test::unit_test_monitor_t::execute_and_translate(boost::function<void ()> const&, unsigned long)
42: #20  /lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0: 
42: #21  /lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0: 
42: #22  /lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0: boost::unit_test::framework::run(unsigned long, bool)
42: --------------------------------------------------------
42: 
42: Calling MPI_Abort now.
42: To break execution in a GDB session, execute 'break MPI_Abort' before running. You can also put the following into your ~/.gdbinit:
42:   set breakpoint pending on
42:   break MPI_Abort
42:   set breakpoint pending auto
42: --------------------------------------------------------------------------
42: MPI_ABORT was invoked on rank 1 in communicator MPI_COMM_WORLD
42: with errorcode 255.
42: 
42: NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
42: You may or may not see output from other processes, depending on
42: exactly when Open MPI kills them.
42: --------------------------------------------------------------------------
41/50 Test #42: test_integration_thermoelastic_2 .........***Failed   11.24 sec
test 44
      Start 44: test_material_deposition_2

44: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_material_deposition"
44: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
44: Test timeout computed to be: 7200
44: Running 11 test cases...
44: Entering test module "MaterialDeposition"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Entering test case "read_material_deposition_file_2d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Leaving test case "read_material_deposition_file_2d"; testing time: 23653us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Entering test case "read_material_deposition_file_3d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Leaving test case "read_material_deposition_file_3d"; testing time: 21752us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(134): Test case "get_elements_to_activate_2d" is skipped because precondition failed: the test only works in serial
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(195): Test case "get_elements_to_activate_3d" is skipped because precondition failed: the test only works in serial
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Entering test case "material_deposition"
44: Running 11 test cases...
44: Entering test module "MaterialDeposition"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Entering test case "read_material_deposition_file_2d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Leaving test case "read_material_deposition_file_2d"; testing time: 507us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Entering test case "read_material_deposition_file_3d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Leaving test case "read_material_deposition_file_3d"; testing time: 238us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(134): Test case "get_elements_to_activate_2d" is skipped because precondition failed: the test only works in serial
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(195): Test case "get_elements_to_activate_3d" is skipped because precondition failed: the test only works in serial
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Entering test case "material_deposition"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Leaving test case "material_deposition"; testing time: 16979698us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Entering test case "deposition_from_scan_path_2d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Leaving test case "material_deposition"; testing time: 16960803us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Entering test case "deposition_from_scan_path_2d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Leaving test case "deposition_from_scan_path_2d"; testing time: 11981us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Entering test case "deposition_from_scan_path_3d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Leaving test case "deposition_from_scan_path_3d"; testing time: 221us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Entering test case "deposition_from_L_scan_path_3d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Leaving test case "deposition_from_scan_path_2d"; testing time: 18987us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Entering test case "deposition_from_scan_path_3d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Leaving test case "deposition_from_scan_path_3d"; testing time: 233us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Entering test case "deposition_from_L_scan_path_3d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Leaving test case "deposition_from_L_scan_path_3d"; testing time: 11326us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Entering test case "deposition_from_diagonal_scan_path_3d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Leaving test case "deposition_from_L_scan_path_3d"; testing time: 12293us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Entering test case "deposition_from_diagonal_scan_path_3d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Leaving test case "deposition_from_diagonal_scan_path_3d"; testing time: 11749us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Entering test case "merge_multiple_deposition_paths"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Leaving test case "merge_multiple_deposition_paths"; testing time: 144us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Entering test case "deposition_quaternion_straight_line"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Leaving test case "deposition_from_diagonal_scan_path_3d"; testing time: 11745us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Entering test case "merge_multiple_deposition_paths"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Leaving test case "merge_multiple_deposition_paths"; testing time: 140us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Entering test case "deposition_quaternion_straight_line"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Leaving test case "deposition_quaternion_straight_line"; testing time: 11856us
44: Leaving test module "MaterialDeposition"; testing time: 17074309us
44: 
44: *** No errors detected
44: 
44: *** No errors detected
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Leaving test case "deposition_quaternion_straight_line"; testing time: 11896us
44: Leaving test module "MaterialDeposition"; testing time: 17018894us
44: 
42/50 Test #44: test_material_deposition_2 ...............   Passed   25.50 sec
test 46
      Start 46: test_microstructure_2

46: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_microstructure"
46: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
46: Test timeout computed to be: 7200
34: n_time_step: 647 time: 6.46 n_dofs (thermal) after cell activation: 1222
46: Running 1 test case...
46: Entering test module "MicroStructure"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Entering test case "G_and_R"
46: Running 1 test case...
46: Entering test module "MicroStructure"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Entering test case "G_and_R"
46: Test case G_and_R did not check any assertions
46: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Leaving test case "G_and_R"; testing time: 464950us
46: Leaving test module "MicroStructure"; testing time: 464999us
46: 
46: *** No errors detected
46: 
46: *** No errors detected
46: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Leaving test case "G_and_R"; testing time: 580605us
46: Leaving test module "MicroStructure"; testing time: 580659us
46: 
43/50 Test #46: test_microstructure_2 ....................   Passed    7.72 sec
test 48
      Start 48: test_thermal_physics_2

48: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_physics"
48: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
48: Test timeout computed to be: 7200
48: Running 7 test cases...
48: Entering test module "ThermalPhysics"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Entering test case "thermal_2d_explicit_host"
48: Running 7 test cases...
48: Entering test module "ThermalPhysics"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Entering test case "thermal_2d_explicit_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Leaving test case "thermal_2d_explicit_host"; testing time: 355187us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Entering test case "thermal_2d_manufactured_solution_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Leaving test case "thermal_2d_explicit_host"; testing time: 282613us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Entering test case "thermal_2d_manufactured_solution_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Leaving test case "thermal_2d_manufactured_solution_host"; testing time: 224729us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Entering test case "initial_temperature_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Leaving test case "thermal_2d_manufactured_solution_host"; testing time: 224322us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Entering test case "initial_temperature_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Leaving test case "initial_temperature_host"; testing time: 199442us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Entering test case "energy_conservation_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Leaving test case "initial_temperature_host"; testing time: 199333us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Entering test case "energy_conservation_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Leaving test case "energy_conservation_host"; testing time: 10051034us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Entering test case "radiation_bcs_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Leaving test case "energy_conservation_host"; testing time: 10051404us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Entering test case "radiation_bcs_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Leaving test case "radiation_bcs_host"; testing time: 4834044us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Entering test case "convection_bcs_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Leaving test case "radiation_bcs_host"; testing time: 4833993us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Entering test case "convection_bcs_host"
34: n_time_step: 671 time: 6.7 n_dofs (thermal) after cell activation: 1223
34: n_time_step: 694 time: 6.93 n_dofs (thermal) after cell activation: 1224
34: 70% completed
34: n_time_step: 717 time: 7.16 n_dofs (thermal) after cell activation: 1226
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Leaving test case "convection_bcs_host"; testing time: 86276007us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Entering test case "reference_temperature_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Leaving test case "convection_bcs_host"; testing time: 86359072us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Entering test case "reference_temperature_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Leaving test case "reference_temperature_host"; testing time: 3149892us
48: Leaving test module "ThermalPhysics"; testing time: 105019495us
48: 
48: *** No errors detected
48: 
48: *** No errors detected
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Leaving test case "reference_temperature_host"; testing time: 3156375us
48: Leaving test module "ThermalPhysics"; testing time: 105180531us
48: 
44/50 Test #48: test_thermal_physics_2 ...................   Passed  113.50 sec
test 50
      Start 50: test_ensemble_management_2

50: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_ensemble_management"
50: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
50: Test timeout computed to be: 7200
50: Running 1 test case...
50: Entering test module "EnsembleManagement"
50: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Entering test case "database_ensemble"
50: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Leaving test case "database_ensemble"; testing time: 34947us
50: Leaving test module "EnsembleManagement"; testing time: 34974us
50: 
50: *** No errors detected
50: Running 1 test case...
50: Entering test module "EnsembleManagement"
50: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Entering test case "database_ensemble"
50: 
50: *** No errors detected
50: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Leaving test case "database_ensemble"; testing time: 69698us
50: Leaving test module "EnsembleManagement"; testing time: 69730us
50: 
45/50 Test #50: test_ensemble_management_2 ...............   Passed    6.42 sec
34: n_time_step: 740 time: 7.39 n_dofs (thermal) after cell activation: 1227
34: n_time_step: 763 time: 7.62 n_dofs (thermal) after cell activation: 1228
34: n_time_step: 787 time: 7.86 n_dofs (thermal) after cell activation: 1229
34: 80% completed
34: n_time_step: 810 time: 8.09 n_dofs (thermal) after cell activation: 1230
34: 20% completed
34: n_time_step: 833 time: 8.32 n_dofs (thermal) after cell activation: 1231
34: n_time_step: 857 time: 8.56 n_dofs (thermal) after cell activation: 1232
34: n_time_step: 880 time: 8.79 n_dofs (thermal) after cell activation: 1233
34: 90% completed
34: n_time_step: 903 time: 9.02 n_dofs (thermal) after cell activation: 1234
34: n_time_step: 927 time: 9.26 n_dofs (thermal) after cell activation: 1235
34: n_time_step: 928 time: 9.27 n_dofs (thermal) after cell activation: 1238
34: n_time_step: 951 time: 9.5 n_dofs (thermal) after cell activation: 1239
34: n_time_step: 975 time: 9.74 n_dofs (thermal) after cell activation: 1240
34: 30% completed
34: n_time_step: 998 time: 9.97 n_dofs (thermal) after cell activation: 1241
34: 100% completed
34: Test case hourglass did not check any assertions
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(169): Leaving test case "hourglass"; testing time: 1398498477us
34: Leaving test module "Integration_3D"; testing time: 4978060297us
34: 
34: *** No errors detected
34: Test case hourglass did not check any assertions
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(169): Leaving test case "hourglass"; testing time: 1398510634us
34: Leaving test module "Integration_3D"; testing time: 4978071549us
34: 
34: *** No errors detected
34: 
46/50 Test #34: test_integration_3d_2 ....................   Passed  4979.03 sec
test 3
      Start  3: test_integration_da_3

3: Test command: /usr/bin/mpiexec "-n" "3" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da"
3: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
3: Test timeout computed to be: 7200
3: Running 3 test cases...
3: Running 3 test cases...
3: Entering test module "Integration_Data_Assimilation"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
3: Entering test module "Integration_Data_Assimilation"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
3: Running 3 test cases...
3: Entering test module "Integration_Data_Assimilation"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Starting the main time stepping loop...
3: 10% completed
3: 20% completed
3: 30% completed
3: 40% completed
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 1 | Old parameters for member 1: 
3: Rank: 2 | Old parameters for member 2: 
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 50% completed
3: 60% completed
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 1 | Old parameters for member 1: 
3: Rank: 2 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 70% completed
3: 80% completed
3: 90% completed
3: 100% completed
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: 10% completed
3: 10% completed
3: 10% completed
3: 20% completed
3: 20% completed
3: 20% completed
3: 30% completed
3: 30% completed
3: 30% completed
3: 40% completed
3: 40% completed
3: 40% completed
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: Updating the ensemble members...
3: Done.
3: Updating the ensemble members...
3: Done.
3: 50% completed
3: 50% completed
3: 50% completed
3: 60% completed
3: 60% completed
3: 60% completed
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: Updating the ensemble members...
3: Done.
3: Updating the ensemble members...
3: Done.
3: 70% completed
3: 70% completed
3: 70% completed
3: 80% completed
3: 80% completed
3: 80% completed
3: 90% completed
3: 90% completed
3: 90% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 39825710us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
3: 100% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 40154212us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 40207557us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: 10% completed
3: 20% completed
3: 30% completed
3: 40% completed
3: 50% completed
3: Rank: 2 | Old parameters for member 2: 
3: Rank: 1 | Old parameters for member 1: 
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: 70% completed
3: 80% completed
3: 90% completed
3: 100% completed
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: 10% completed
3: 10% completed
3: 10% completed
3: 20% completed
3: 20% completed
3: 20% completed
3: 30% completed
3: 30% completed
3: 30% completed
3: 40% completed
3: 40% completed
3: 40% completed
3: 50% completed
3: 50% completed
3: 50% completed
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Done.
3: 60% completed
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: 70% completed
3: 70% completed
3: 70% completed
3: 80% completed
3: 80% completed
3: 80% completed
3: 90% completed
3: 90% completed
3: 90% completed
3: 100% completed
3: 100% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2030360us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2133881us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2464915us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: 10% completed
3: 20% completed
3: 30% completed
3: 40% completed
3: 50% completed
3: Rank: 2 | Old parameters for member 2: 
3: Rank: 1 | Old parameters for member 1: 
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: 70% completed
3: 80% completed
3: 90% completed
3: 100% completed
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: 10% completed
3: 10% completed
3: 10% completed
3: 20% completed
3: 20% completed
3: 20% completed
3: 30% completed
3: 30% completed
3: 30% completed
3: 40% completed
3: 40% completed
3: 40% completed
3: 50% completed
3: 50% completed
3: 50% completed
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Updating the ensemble members...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Done.
3: 60% completed
3: 70% completed
3: 80% completed
3: 70% completed
3: 70% completed
3: 90% completed
3: 80% completed
3: 80% completed
3: 90% completed
3: 90% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 1826179us
3: Leaving test module "Integration_Data_Assimilation"; testing time: 44114488us
3: 
3: *** No errors detected
3: 100% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 1927679us
3: Leaving test module "Integration_Data_Assimilation"; testing time: 44165775us
3: 
3: *** No errors detected
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 1879652us
3: Leaving test module "Integration_Data_Assimilation"; testing time: 44170473us
3: 
3: *** No errors detected
3: 
47/50 Test  #3: test_integration_da_3 ....................   Passed   44.87 sec
test 4
      Start  4: test_integration_da_6

4: Test command: /usr/bin/mpiexec "-n" "6" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da"
4: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
4: Test timeout computed to be: 7200
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Running 3 test cases...
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Entering test module "Integration_Data_Assimilation"
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Starting the main time stepping loop...
4: 10% completed
4: 20% completed
4: 30% completed
4: 40% completed
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 2 | Old parameters for member 1: 
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 1 | Old parameters for member 0: 
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 50% completed
4: 60% completed
4: Rank: 2 | Old parameters for member 1: 
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 1 | Old parameters for member 0: 
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 70% completed
4: 80% completed
4: 90% completed
4: 100% completed
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0211...
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 37300374us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 37311193us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: 100% completed
4: 100% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 37789469us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 37927797us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 37946293us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 37976490us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: 10% completed
4: 20% completed
4: 30% completed
4: 40% completed
4: 50% completed
4: Rank: 1 | Old parameters for member 0: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 2 | Old parameters for member 1: 
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: 80% completed
4: 90% completed
4: 100% completed
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 30% completed
4: 30% completed
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4: 30% completed
4: 30% completed
4: 30% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: 50% completed
4: 50% completed
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.12...
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 80% completed
4: 70% completed
4: 70% completed
4: 80% completed
4: 90% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 1998187us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2646294us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2206959us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2021327us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2084084us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2720137us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: 10% completed
4: 20% completed
4: 30% completed
4: 40% completed
4: 50% completed
4: Rank: 2 | Old parameters for member 1: 
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 1 | Old parameters for member 0: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: 80% completed
4: 90% completed
4: 100% completed
4: Reading the experimental log file...
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Done.
4: 60% completed
4: Done.
4: 60% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 80% completed
4: 80% completed
4: 90% completed
4: 90% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2206344us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 42204402us
4: 
4: *** No errors detected
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2173353us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 42204080us
4: 
4: *** No errors detected
4: 100% completed
4: 100% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2304230us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 42300945us
4: 
4: *** No errors detected
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2411028us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 42337286us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2306024us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 42337530us
4: 
4: *** No errors detected
4: 
4: *** No errors detected
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2390248us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 42337100us
4: 
4: *** No errors detected
4: 
48/50 Test  #4: test_integration_da_6 ....................   Passed   43.06 sec
test 7
      Start  7: test_closest_source_point_adaptation_3

7: Test command: /usr/bin/mpiexec "-n" "3" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_closest_source_point_adaptation"
7: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
7: Test timeout computed to be: 7200
7: Running 1 test case...
7: Running 1 test case...
7: Entering test module "ClosestSourcePointAdaptation"
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
7: Running 1 test case...
7: Entering test module "ClosestSourcePointAdaptation"
7: Entering test module "ClosestSourcePointAdaptation"
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 5733438us
7: Leaving test module "ClosestSourcePointAdaptation"; testing time: 5733503us
7: 
7: *** No errors detected
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 5734116us
7: Leaving test module "ClosestSourcePointAdaptation"; testing time: 5734196us
7: 
7: *** No errors detected
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 5734517us
7: Leaving test module "ClosestSourcePointAdaptation"; testing time: 5734588us
7: 
7: *** No errors detected
7: 
49/50 Test  #7: test_closest_source_point_adaptation_3 ...   Passed    6.40 sec
test 8
      Start  8: test_closest_source_point_adaptation_6

8: Test command: /usr/bin/mpiexec "-n" "6" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_closest_source_point_adaptation"
8: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
8: Test timeout computed to be: 7200
8: Running 1 test case...
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Running 1 test case...
8: Running 1 test case...
8: Running 1 test case...
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: 
8: *** No errors detected
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 3646036us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 3646108us
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 3646296us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 3646409us
8: 
8: *** No errors detected
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 3646408us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 3646575us
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 3646605us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 3646716us
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 3646681us
8: 
8: *** No errors detected
8: 
8: *** No errors detected
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 3646873us
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 3646812us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 3646890us
8: 
8: *** No errors detected
8: 
8: *** No errors detected
8: 
50/50 Test  #8: test_closest_source_point_adaptation_6 ...   Passed    4.36 sec

The following tests passed:
	test_closest_source_point_adaptation_1
	test_data_assimilator_1
	test_experimental_data_1
	test_geometry_1
	test_heat_source_1
	test_integration_da_2
	test_closest_source_point_adaptation_2
	test_material_property_1
	test_material_property_device_1
	test_integration_da_1
	test_post_processor_1
	test_quaternion_1
	test_scan_path_1
	test_thermal_operator_1
	test_thermal_operator_device_1
	test_mechanical_operator_1
	test_timer_1
	test_utils_1
	test_validate_input_database_1
	test_thermal_physics_device_1
	test_integration_2d_1
	test_mechanical_physics_1
	test_integration_2d_device_1
	test_integration_3d_amr_1
	test_integration_3d_amr_device_1
	test_integration_da_augmented_1
	test_integration_3d_device_1
	test_material_deposition_1
	test_microstructure_1
	test_thermal_physics_1
	test_ensemble_management_1
	test_connected_components_1
	test_connected_components_2
	test_integration_2d_2
	test_integration_2d_device_2
	test_integration_3d_amr_2
	test_integration_3d_amr_device_2
	test_integration_da_augmented_2
	test_material_deposition_2
	test_microstructure_2
	test_thermal_physics_2
	test_ensemble_management_2
	test_integration_3d_2
	test_integration_da_3
	test_integration_da_6
	test_closest_source_point_adaptation_3
	test_closest_source_point_adaptation_6

94% tests passed, 3 tests failed out of 50

Total Test time (real) = 10834.87 sec

The following tests FAILED:
	 33 - test_integration_3d_1 (Timeout)
	 41 - test_integration_thermoelastic_1 (Timeout)
	 42 - test_integration_thermoelastic_2 (Failed)
Errors while running CTest
Output from these tests are in: /var/jenkins/workspace/adamantine-nightly/build/Testing/Temporary/LastTest.log
Use "--rerun-failed --output-on-failure" to re-run the failed cases verbosely.
[Pipeline] }
[Pipeline] // dir
Post stage
[Pipeline] xunit
INFO: Processing CTest-Version 3.x (default)
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
$ docker stop --time=1 cc3a852a6f92e43b13282e4dd18678794fc1090a55e3cc60f00a2aca533c1a87
INFO: [CTest-Version 3.x (default)] - 1 test report file(s) were found with the pattern 'build/Testing/**/Test.xml' relative to '/var/jenkins/workspace/adamantine-nightly' for the testing framework 'CTest-Version 3.x (default)'.
$ docker rm -f --volumes cc3a852a6f92e43b13282e4dd18678794fc1090a55e3cc60f00a2aca533c1a87
[Pipeline] // withDockerContainer
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
Failed in branch CPU
34: 40% completed
34: 50% completed
34: 60% completed
34: 70% completed
34: 80% completed
34: 90% completed
34: 100% completed
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Leaving test case "integration_3D_five_axis"; testing time: 2718018215us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(117): Entering test case "integration_3D_checkpoint_restart"
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Leaving test case "integration_3D_five_axis"; testing time: 2717848322us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(117): Entering test case "integration_3D_checkpoint_restart"
34: 10% completed
34: 20% completed
34: 30% completed
34: 40% completed
34: 50% completed
34: 60% completed
34: 70% completed
34: Checkpoint reached
34: 80% completed
34: 90% completed
34: 100% completed
34: Restarting from file
34: 80% completed
34: 90% completed
34: 100% completed
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(117): Leaving test case "integration_3D_checkpoint_restart"; testing time: 94175007us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(169): Entering test case "hourglass"
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(117): Leaving test case "integration_3D_checkpoint_restart"; testing time: 94180932us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(169): Entering test case "hourglass"
34: n_time_step: 1 time: 0 n_dofs (thermal) after mesh refinement: 1172
34: n_time_step: 100 time: 0.99 n_dofs (thermal) after cell activation: 1178
34: 10% completed
34: n_time_step: 101 time: 1 n_dofs (thermal) after cell activation: 1178
34: n_time_step: 124 time: 1.23 n_dofs (thermal) after cell activation: 1181
34: n_time_step: 147 time: 1.46 n_dofs (thermal) after cell activation: 1184
34: n_time_step: 170 time: 1.69 n_dofs (thermal) after cell activation: 1187
34: n_time_step: 171 time: 1.7 n_dofs (thermal) after cell activation: 1187
34: n_time_step: 194 time: 1.93 n_dofs (thermal) after cell activation: 1190
34: 20% completed
34: n_time_step: 217 time: 2.16 n_dofs (thermal) after cell activation: 1193
34: n_time_step: 241 time: 2.4 n_dofs (thermal) after cell activation: 1196
34: n_time_step: 264 time: 2.63 n_dofs (thermal) after cell activation: 1199
34: n_time_step: 287 time: 2.86 n_dofs (thermal) after cell activation: 1202
34: n_time_step: 301 time: 3 n_dofs (thermal) after cell activation: 1204
34: 30% completed
34: n_time_step: 325 time: 3.24 n_dofs (thermal) after cell activation: 1205
34: n_time_step: 348 time: 3.47 n_dofs (thermal) after cell activation: 1206
34: n_time_step: 371 time: 3.7 n_dofs (thermal) after cell activation: 1207
34: n_time_step: 395 time: 3.94 n_dofs (thermal) after cell activation: 1208
34: 40% completed
34: n_time_step: 418 time: 4.17 n_dofs (thermal) after cell activation: 1209
34: n_time_step: 441 time: 4.4 n_dofs (thermal) after cell activation: 1210
34: n_time_step: 465 time: 4.64 n_dofs (thermal) after cell activation: 1211
34: n_time_step: 488 time: 4.87 n_dofs (thermal) after cell activation: 1212
34: 50% completed
34: n_time_step: 507 time: 5.06 n_dofs (thermal) after cell activation: 1216
34: n_time_step: 531 time: 5.3 n_dofs (thermal) after cell activation: 1217
34: n_time_step: 554 time: 5.53 n_dofs (thermal) after cell activation: 1218
34: n_time_step: 577 time: 5.76 n_dofs (thermal) after cell activation: 1219
34: n_time_step: 601 time: 6 n_dofs (thermal) after cell activation: 1220
34: 60% completed
34: n_time_step: 624 time: 6.23 n_dofs (thermal) after cell activation: 1221
34: n_time_step: 647 time: 6.46 n_dofs (thermal) after cell activation: 1222
34: n_time_step: 671 time: 6.7 n_dofs (thermal) after cell activation: 1223
34: n_time_step: 694 time: 6.93 n_dofs (thermal) after cell activation: 1224
34: 70% completed
34: n_time_step: 717 time: 7.16 n_dofs (thermal) after cell activation: 1226
34: n_time_step: 740 time: 7.39 n_dofs (thermal) after cell activation: 1227
34: n_time_step: 763 time: 7.62 n_dofs (thermal) after cell activation: 1228
34: n_time_step: 787 time: 7.86 n_dofs (thermal) after cell activation: 1229
34: 80% completed
34: n_time_step: 810 time: 8.09 n_dofs (thermal) after cell activation: 1230
34: n_time_step: 833 time: 8.32 n_dofs (thermal) after cell activation: 1231
34: n_time_step: 857 time: 8.56 n_dofs (thermal) after cell activation: 1232
34: n_time_step: 880 time: 8.79 n_dofs (thermal) after cell activation: 1233
34: 90% completed
34: n_time_step: 903 time: 9.02 n_dofs (thermal) after cell activation: 1234
34: n_time_step: 927 time: 9.26 n_dofs (thermal) after cell activation: 1235
34: n_time_step: 928 time: 9.27 n_dofs (thermal) after cell activation: 1238
34: n_time_step: 951 time: 9.5 n_dofs (thermal) after cell activation: 1239
34: n_time_step: 975 time: 9.74 n_dofs (thermal) after cell activation: 1240
34: n_time_step: 998 time: 9.97 n_dofs (thermal) after cell activation: 1241
34: 100% completed
34: Test case hourglass did not check any assertions
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(169): Leaving test case "hourglass"; testing time: 2206526426us
34: Leaving test module "Integration_3D"; testing time: 6583439436us
34: 
34: *** No errors detected
34: Test case hourglass did not check any assertions
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(169): Leaving test case "hourglass"; testing time: 2206538993us
34: Leaving test module "Integration_3D"; testing time: 6583825811us
34: 
34: *** No errors detected
34: 
46/50 Test #34: test_integration_3d_2 ....................   Passed  6588.35 sec
test 3
      Start  3: test_integration_da_3

3: Test command: /usr/bin/mpiexec "-n" "3" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da"
3: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
3: Test timeout computed to be: 7200
3: Running 3 test cases...
3: Entering test module "Integration_Data_Assimilation"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
3: Running 3 test cases...
3: Entering test module "Integration_Data_Assimilation"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
3: Running 3 test cases...
3: Entering test module "Integration_Data_Assimilation"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Starting the main time stepping loop...
3: 10% completed
3: 20% completed
3: 30% completed
3: 40% completed
3: Rank: 1 | Old parameters for member 1: 
3: Rank: 2 | Old parameters for member 2: 
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 50% completed
3: 60% completed
3: Rank: 1 | Old parameters for member 1: 
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 2 | Old parameters for member 2: 
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 70% completed
3: 80% completed
3: 90% completed
3: 100% completed
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: 10% completed
3: 10% completed
3: 10% completed
3: 20% completed
3: 20% completed
3: 20% completed
3: 30% completed
3: 30% completed
3: 30% completed
3: 40% completed
3: 40% completed
3: 40% completed
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Updating the ensemble members...
3: Done.
3: Done.
3: Updating the ensemble members...
3: Done.
3: 50% completed
3: 50% completed
3: 50% completed
3: 60% completed
3: 60% completed
3: 60% completed
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: Updating the ensemble members...
3: Done.
3: Updating the ensemble members...
3: Done.
3: 70% completed
3: 70% completed
3: 70% completed
3: 80% completed
3: 80% completed
3: 80% completed
3: 90% completed
3: 90% completed
3: 90% completed
3: 100% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 64019595us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 64106329us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 64410269us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: 10% completed
3: 20% completed
3: 30% completed
3: 40% completed
3: 50% completed
3: Rank: 1 | Old parameters for member 1: 
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 2 | Old parameters for member 2: 
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: 70% completed
3: 80% completed
3: 90% completed
3: 100% completed
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: 10% completed
3: 10% completed
3: 10% completed
3: 20% completed
3: 20% completed
3: 20% completed
3: 30% completed
3: 30% completed
3: 30% completed
3: 40% completed
3: 40% completed
3: 40% completed
3: 50% completed
3: 50% completed
3: 50% completed
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: 70% completed
3: 70% completed
3: 70% completed
3: 80% completed
3: 80% completed
3: 80% completed
3: 90% completed
3: 90% completed
3: 90% completed
3: 100% completed
3: 100% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 3001693us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2963988us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2659944us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: 10% completed
3: 20% completed
3: 30% completed
3: 40% completed
3: 50% completed
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 2 | Old parameters for member 2: 
3: Rank: 1 | Old parameters for member 1: 
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: 70% completed
3: 80% completed
3: 90% completed
3: 100% completed
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: 10% completed
3: 10% completed
3: 10% completed
3: 20% completed
3: 20% completed
3: 20% completed
3: 30% completed
3: 30% completed
3: 30% completed
3: 40% completed
3: 40% completed
3: 40% completed
3: 50% completed
3: 50% completed
3: 50% completed
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Updating the ensemble members...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Done.
3: 60% completed
3: 70% completed
3: 70% completed
3: 70% completed
3: 80% completed
3: 80% completed
3: 80% completed
3: 90% completed
3: 90% completed
3: 90% completed
3: 100% completed
3: 100% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2574742us
3: Leaving test module "Integration_Data_Assimilation"; testing time: 69596157us
3: 
3: *** No errors detected
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2555956us
3: Leaving test module "Integration_Data_Assimilation"; testing time: 69626424us
3: 
3: *** No errors detected
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2560546us
3: Leaving test module "Integration_Data_Assimilation"; testing time: 69630919us
3: 
3: *** No errors detected
3: 
47/50 Test  #3: test_integration_da_3 ....................   Passed   71.02 sec
test 4
      Start  4: test_integration_da_6

4: Test command: /usr/bin/mpiexec "-n" "6" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da"
4: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
4: Test timeout computed to be: 7200
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Starting the main time stepping loop...
4: 10% completed
4: 20% completed
4: 30% completed
4: 40% completed
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 1 | Old parameters for member 0: 
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 2 | Old parameters for member 1: 
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 50% completed
4: 60% completed
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 2 | Old parameters for member 1: 
4: Rank: 1 | Old parameters for member 0: 
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 70% completed
4: 80% completed
4: 90% completed
4: 100% completed
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 20% completed
4: 20% completed
4: 20% completed
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4: 20% completed
4: 20% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 100% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58019401us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58089519us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58176585us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58469837us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58603164us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58790652us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: 10% completed
4: 20% completed
4: 30% completed
4: 40% completed
4: 50% completed
4: Rank: 2 | Old parameters for member 1: 
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 1 | Old parameters for member 0: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: 80% completed
4: 90% completed
4: 100% completed
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
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4: 20% completed
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4: 40% completed
4: 50% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: 80% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Done.
4: 60% completed
4: 90% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 3187599us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 3271392us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: 100% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2599759us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2829565us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 3260861us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2961112us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: 10% completed
4: 20% completed
4: 30% completed
4: 40% completed
4: 50% completed
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 2 | Old parameters for member 1: 
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 1 | Old parameters for member 0: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: 80% completed
4: 90% completed
4: 100% completed
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 30% completed
4: 30% completed
4: 40% completed
4: 40% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 50% completed
4: 50% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: 70% completed
4: 80% completed
4: 80% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Done.
4: Done.
4: 60% completed
4: 60% completed
4: 90% completed
4: 90% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2859842us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 64066975us
4: 
4: *** No errors detected
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2648626us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 64081523us
4: 
4: *** No errors detected
4: 100% completed
4: 100% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2890304us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 64251355us
4: 
4: *** No errors detected
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2796095us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 64233709us
4: 
4: *** No errors detected
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2870297us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 64260870us
4: 
4: *** No errors detected
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2821323us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 64252427us
4: 
4: *** No errors detected
4: 
48/50 Test  #4: test_integration_da_6 ....................   Passed   66.30 sec
test 7
      Start  7: test_closest_source_point_adaptation_3

7: Test command: /usr/bin/mpiexec "-n" "3" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_closest_source_point_adaptation"
7: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
7: Test timeout computed to be: 7200
7: Running 1 test case...
7: Entering test module "ClosestSourcePointAdaptation"
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
7: Running 1 test case...
7: Entering test module "ClosestSourcePointAdaptation"
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
7: Running 1 test case...
7: Entering test module "ClosestSourcePointAdaptation"
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 7027203us
7: Leaving test module "ClosestSourcePointAdaptation"; testing time: 7027253us
7: 
7: *** No errors detected
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 7018664us
7: Leaving test module "ClosestSourcePointAdaptation"; testing time: 7018727us
7: 
7: *** No errors detected
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 7026235us
7: Leaving test module "ClosestSourcePointAdaptation"; testing time: 7026306us
7: 
7: *** No errors detected
7: 
49/50 Test  #7: test_closest_source_point_adaptation_3 ...   Passed    8.46 sec
test 8
      Start  8: test_closest_source_point_adaptation_6

8: Test command: /usr/bin/mpiexec "-n" "6" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_closest_source_point_adaptation"
8: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
8: Test timeout computed to be: 7200
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: 
8: *** No errors detected
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4374171us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4374225us
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4367518us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4367583us
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4366105us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4366168us
8: 
8: *** No errors detected
8: 
8: *** No errors detected
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4362225us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4362292us
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4361354us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4361430us
8: 
8: *** No errors detected
8: 
8: *** No errors detected
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4374407us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4374459us
8: 
8: *** No errors detected
8: 
50/50 Test  #8: test_closest_source_point_adaptation_6 ...   Passed    6.46 sec

The following tests passed:
	test_closest_source_point_adaptation_1
	test_data_assimilator_1
	test_experimental_data_1
	test_geometry_1
	test_heat_source_1
	test_integration_da_2
	test_closest_source_point_adaptation_2
	test_material_property_1
	test_material_property_device_1
	test_integration_da_1
	test_post_processor_1
	test_quaternion_1
	test_scan_path_1
	test_mechanical_operator_1
	test_thermal_operator_1
	test_thermal_operator_device_1
	test_timer_1
	test_utils_1
	test_validate_input_database_1
	test_thermal_physics_device_1
	test_mechanical_physics_1
	test_integration_2d_device_1
	test_integration_2d_1
	test_integration_3d_amr_1
	test_integration_3d_amr_device_1
	test_integration_da_augmented_1
	test_integration_3d_device_1
	test_material_deposition_1
	test_microstructure_1
	test_thermal_physics_1
	test_ensemble_management_1
	test_connected_components_1
	test_connected_components_2
	test_integration_2d_2
	test_integration_2d_device_2
	test_integration_3d_amr_2
	test_integration_3d_amr_device_2
	test_integration_da_augmented_2
	test_material_deposition_2
	test_microstructure_2
	test_thermal_physics_2
	test_ensemble_management_2
	test_integration_3d_2
	test_integration_da_3
	test_integration_da_6
	test_closest_source_point_adaptation_3
	test_closest_source_point_adaptation_6

94% tests passed, 3 tests failed out of 50

Total Test time (real) = 13984.94 sec

The following tests FAILED:
	 33 - test_integration_3d_1 (Timeout)
	 41 - test_integration_thermoelastic_1 (Timeout)
	 42 - test_integration_thermoelastic_2 (Failed)
Errors while running CTest
Output from these tests are in: /var/jenkins/workspace/adamantine-nightly/build/Testing/Temporary/LastTest.log
Use "--rerun-failed --output-on-failure" to re-run the failed cases verbosely.
[Pipeline] }
[Pipeline] // dir
Post stage
[Pipeline] xunit
INFO: Processing CTest-Version 3.x (default)
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
$ docker stop --time=1 a6cf74f005d89c21e10069fbc0cca15205bfb889592e2487a2c48c2eb7f615a0
INFO: [CTest-Version 3.x (default)] - 1 test report file(s) were found with the pattern 'build/Testing/**/Test.xml' relative to '/var/jenkins/workspace/adamantine-nightly' for the testing framework 'CTest-Version 3.x (default)'.
$ docker rm -f --volumes a6cf74f005d89c21e10069fbc0cca15205bfb889592e2487a2c48c2eb7f615a0
[Pipeline] // withDockerContainer
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
Failed in branch CUDA
[Pipeline] // parallel
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // timeout
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] End of Pipeline
ERROR: script returned exit code 8
Finished: FAILURE