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2: 
2: *** No errors detected
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 17366040us
2: Leaving test module "Integration_Data_Assimilation"; testing time: 265619507us
2: 
 6/50 Test  #2: test_integration_da_2 ....................   Passed  270.36 sec
test 6
      Start  6: test_closest_source_point_adaptation_2

6: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_closest_source_point_adaptation"
6: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
6: Test timeout computed to be: 7200
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 1 frame(s).
1: Starting the main time stepping loop...
6: Running 1 test case...
6: Entering test module "ClosestSourcePointAdaptation"
6: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
1: 10% completed
6: Running 1 test case...
6: Entering test module "ClosestSourcePointAdaptation"
6: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
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1: Performing data assimilation at time 0.12...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
1: Updating the ensemble members...
1: Done.
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1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 20710745us
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 1 frame(s).
1: Starting the main time stepping loop...
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1: 30% completed
1: 40% completed
1: 50% completed
1: Performing data assimilation at time 0.12...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
1: Updating the ensemble members...
1: Done.
1: 60% completed
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1: 90% completed
13: 10% completed
6: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 18880417us
6: Leaving test module "ClosestSourcePointAdaptation"; testing time: 18880481us
6: 
6: *** No errors detected
6: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 18626438us
6: Leaving test module "ClosestSourcePointAdaptation"; testing time: 18626495us
6: 
6: *** No errors detected
6: 
 7/50 Test  #6: test_closest_source_point_adaptation_2 ...   Passed   21.16 sec
test 14
      Start 14: test_material_property_1

14: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_material_property"
14: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
14: Test timeout computed to be: 7200
test 15
      Start 15: test_material_property_device_1

15: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_material_property_device"
15: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
15: Test timeout computed to be: 7200
1: 100% completed
15: Running 4 test cases...
15: Entering test module "MaterialPropertyDevice"
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(13): Entering test case "material_property_device"
14: Running 4 test cases...
14: Entering test module "MaterialProperty"
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(13): Entering test case "material_property_host"
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(13): Leaving test case "material_property_device"; testing time: 197579us
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(18): Entering test case "ratios_device"
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(13): Leaving test case "material_property_host"; testing time: 163837us
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(18): Entering test case "ratios_host"
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(18): Leaving test case "ratios_device"; testing time: 188143us
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(20): Entering test case "material_property_table_device"
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(18): Leaving test case "ratios_host"; testing time: 164726us
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(20): Entering test case "material_property_table_host"
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(20): Leaving test case "material_property_table_device"; testing time: 127098us
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(25): Entering test case "material_property_polynomials_device"
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(20): Leaving test case "material_property_table_host"; testing time: 107627us
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(25): Entering test case "material_property_polynomials_host"
15: 
15: *** No errors detected
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(25): Leaving test case "material_property_polynomials_device"; testing time: 134965us
15: Leaving test module "MaterialPropertyDevice"; testing time: 648010us
14: 
14: *** No errors detected
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(25): Leaving test case "material_property_polynomials_host"; testing time: 109369us
14: Leaving test module "MaterialProperty"; testing time: 545790us
15: 
 8/50 Test #15: test_material_property_device_1 ..........   Passed    3.86 sec
test 16
      Start 16: test_mechanical_operator_1

16: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_mechanical_operator"
16: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
16: Test timeout computed to be: 7200
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 1 frame(s).
14: 
 9/50 Test #14: test_material_property_1 .................   Passed    3.94 sec
test 17
      Start 17: test_mechanical_physics_1

17: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_mechanical_physics"
17: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
17: Test timeout computed to be: 7200
1: Starting the main time stepping loop...
1: 10% completed
1: 20% completed
16: Running 3 test cases...
16: Entering test module "MechanicalOperator"
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(72): Entering test case "elastostatic"
17: Running 9 test cases...
17: Entering test module "MechanicalPhysics"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(198): Entering test case "elastostatic"
1: 30% completed
1: 40% completed
1: 50% completed
1: Performing data assimilation at time 0.12...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(198): Leaving test case "elastostatic"; testing time: 2870894us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(276): Entering test case "elastoplastic_residual"
1: Updating the ensemble members...
1: Done.
1: 60% completed
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17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(276): Leaving test case "elastoplastic_residual"; testing time: 2461967us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(397): Entering test case "fe_nothing"
1: 100% completed
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(397): Leaving test case "fe_nothing"; testing time: 2760095us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(664): Entering test case "thermoelastic_eshelby"
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 26132946us
1: Leaving test module "Integration_Data_Assimilation"; testing time: 302616283us
1: 
1: *** No errors detected
1: 
10/50 Test  #1: test_integration_da_1 ....................   Passed  307.65 sec
test 18
      Start 18: test_post_processor_1

18: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_post_processor"
18: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
18: Test timeout computed to be: 7200
18: Running 2 test cases...
18: Entering test module "PostProcessor"
18: /var/jenkins/workspace/adamantine-nightly/tests/test_post_processor.cc(27): Entering test case "thermal_post_processor"
18: /var/jenkins/workspace/adamantine-nightly/tests/test_post_processor.cc(27): Leaving test case "thermal_post_processor"; testing time: 1404445us
18: /var/jenkins/workspace/adamantine-nightly/tests/test_post_processor.cc(149): Entering test case "mechanical_post_processor"
18: /var/jenkins/workspace/adamantine-nightly/tests/test_post_processor.cc(149): Leaving test case "mechanical_post_processor"; testing time: 17870293us
18: Leaving test module "PostProcessor"; testing time: 19274828us
18: 
18: *** No errors detected
18: 
11/50 Test #18: test_post_processor_1 ....................   Passed   23.55 sec
test 19
      Start 19: test_quaternion_1

19: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_quaternion"
19: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
19: Test timeout computed to be: 7200
19: Running 1 test case...
19: Entering test module "Quaternion"
19: /var/jenkins/workspace/adamantine-nightly/tests/test_quaternion.cc(11): Entering test case "rotation"
19: 
19: *** No errors detected
19: /var/jenkins/workspace/adamantine-nightly/tests/test_quaternion.cc(11): Leaving test case "rotation"; testing time: 194us
19: Leaving test module "Quaternion"; testing time: 225us
19: 
12/50 Test #19: test_quaternion_1 ........................   Passed    9.04 sec
test 20
      Start 20: test_scan_path_1

20: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_scan_path"
20: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
20: Test timeout computed to be: 7200
20: Running 3 test cases...
20: Entering test module "ScanPath"
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(36): Entering test case "scan_path"
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(36): Leaving test case "scan_path"; testing time: 31481us
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(78): Entering test case "scan_path_location"
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(78): Leaving test case "scan_path_location"; testing time: 191us
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(106): Entering test case "five_axis"
20: 
20: *** No errors detected
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(106): Leaving test case "five_axis"; testing time: 39874us
20: Leaving test module "ScanPath"; testing time: 72204us
20: 
13/50 Test #20: test_scan_path_1 .........................   Passed    5.40 sec
test 21
      Start 21: test_thermal_operator_1

21: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_operator"
21: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
21: Test timeout computed to be: 7200
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(72): Leaving test case "elastostatic"; testing time: 51938503us
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(302): Entering test case "thermoelastic"
21: Running 6 test cases...
21: Entering test module "ThermalOperator"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(41): Entering test case "thermal_operator"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(41): Leaving test case "thermal_operator"; testing time: 812195us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(148): Entering test case "spmv"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(148): Leaving test case "spmv"; testing time: 1035765us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(265): Entering test case "spmv_anisotropic"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(265): Leaving test case "spmv_anisotropic"; testing time: 997855us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(415): Entering test case "spmv_anisotropic_angle"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(415): Leaving test case "spmv_anisotropic_angle"; testing time: 3205498us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(580): Entering test case "spmv_rad"
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(302): Leaving test case "thermoelastic"; testing time: 14062716us
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(393): Entering test case "jacobian"
16: 
16: *** No errors detected
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(393): Leaving test case "jacobian"; testing time: 713183us
16: Leaving test module "MechanicalOperator"; testing time: 66715468us
16: 
14/50 Test #16: test_mechanical_operator_1 ...............   Passed   69.93 sec
test 22
      Start 22: test_thermal_operator_device_1

22: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_operator_device"
22: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
22: Test timeout computed to be: 7200
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(580): Leaving test case "spmv_rad"; testing time: 9837228us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(772): Entering test case "spmv_conv"
22: Running 4 test cases...
22: Entering test module "ThermalOperatorDevice"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(31): Entering test case "thermal_operator_dev"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(31): Leaving test case "thermal_operator_dev"; testing time: 544105us
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(124): Entering test case "spmv"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(124): Leaving test case "spmv"; testing time: 405966us
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(237): Entering test case "mf_spmv"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(237): Leaving test case "mf_spmv"; testing time: 3264441us
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(375): Entering test case "spmv_anisotropic_angle"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(375): Leaving test case "spmv_anisotropic_angle"; testing time: 1118304us
22: Leaving test module "ThermalOperatorDevice"; testing time: 5334377us
22: 
22: *** No errors detected
22: 
15/50 Test #22: test_thermal_operator_device_1 ...........   Passed    8.35 sec
test 23
      Start 23: test_thermal_physics_device_1

23: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_physics_device"
23: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
23: Test timeout computed to be: 7200
23: Running 4 test cases...
23: Entering test module "ThermalPhysicsDevice"
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(13): Entering test case "thermal_2d_explicit_device"
21: 
21: *** No errors detected
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(772): Leaving test case "spmv_conv"; testing time: 9569252us
21: Leaving test module "ThermalOperator"; testing time: 25460119us
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(13): Leaving test case "thermal_2d_explicit_device"; testing time: 697173us
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(26): Entering test case "thermal_2d_manufactured_solution_device"
21: 
16/50 Test #21: test_thermal_operator_1 ..................   Passed   31.60 sec
test 24
      Start 24: test_timer_1

24: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_timer"
24: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
24: Test timeout computed to be: 7200
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(26): Leaving test case "thermal_2d_manufactured_solution_device"; testing time: 474700us
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(31): Entering test case "initial_temperature_device"
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(31): Leaving test case "initial_temperature_device"; testing time: 217753us
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(36): Entering test case "energy_conservation_device"
24: Running 1 test case...
24: Entering test module "Timer"
24: /var/jenkins/workspace/adamantine-nightly/tests/test_timer.cc(15): Entering test case "test_timer"
24: 
24: *** No errors detected
24: /var/jenkins/workspace/adamantine-nightly/tests/test_timer.cc(15): Leaving test case "test_timer"; testing time: 623844us
24: Leaving test module "Timer"; testing time: 623899us
24: 
17/50 Test #24: test_timer_1 .............................   Passed    4.10 sec
test 25
      Start 25: test_utils_1

25: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_utils"
25: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
25: Test timeout computed to be: 7200
25: Running 1 test case...
25: Entering test module "utils"
25: /var/jenkins/workspace/adamantine-nightly/tests/test_utils.cc(11): Entering test case "utils"
25: 
25: *** No errors detected
25: /var/jenkins/workspace/adamantine-nightly/tests/test_utils.cc(11): Leaving test case "utils"; testing time: 53247us
25: Leaving test module "utils"; testing time: 53286us
25: 
18/50 Test #25: test_utils_1 .............................   Passed    3.53 sec
test 26
      Start 26: test_validate_input_database_1

26: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_validate_input_database"
26: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
26: Test timeout computed to be: 7200
26: Running 3 test cases...
26: Entering test module "validate_input_database"
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(14): Entering test case "expected_passes"
26: Test case expected_passes did not check any assertions
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(14): Leaving test case "expected_passes"; testing time: 754us
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(55): Entering test case "parse_test_input_files"
26: Test case parse_test_input_files did not check any assertions
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(55): Leaving test case "parse_test_input_files"; testing time: 105267us
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(76): Entering test case "expected_failures"
26: 
26: *** No errors detected
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(76): Leaving test case "expected_failures"; testing time: 71762us
26: Leaving test module "validate_input_database"; testing time: 177888us
26: 
19/50 Test #26: test_validate_input_database_1 ...........   Passed    4.11 sec
test 27
      Start 27: test_connected_components_1

27: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_connected_components"
27: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
27: Test timeout computed to be: 7200
27: Running 4 test cases...
27: Entering test module "Master Test Suite"
27: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(44): Entering test case "connected_components"
13: 20% completed
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(664): Leaving test case "thermoelastic_eshelby"; testing time: 217932748us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(692): Entering test case "elastoplastic_radial_return"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(692): Leaving test case "elastoplastic_radial_return"; testing time: 1468351us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(873): Entering test case "cell_data_transfer_refine_coarsen"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(873): Leaving test case "cell_data_transfer_refine_coarsen"; testing time: 10507328us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(991): Entering test case "activation_strain_for_newly_active_cells"
23: 
23: *** No errors detected
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(36): Leaving test case "energy_conservation_device"; testing time: 160171948us
23: Leaving test module "ThermalPhysicsDevice"; testing time: 161561777us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(991): Leaving test case "activation_strain_for_newly_active_cells"; testing time: 1913059us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(1133): Entering test case "thermoelastic_stress_uniform_heating"
23: 
20/50 Test #23: test_thermal_physics_device_1 ............   Passed  164.68 sec
test 29
      Start 29: test_integration_2d_1

29: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_2d"
29: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
29: Test timeout computed to be: 7200
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(1133): Leaving test case "thermoelastic_stress_uniform_heating"; testing time: 1088411us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(1241): Entering test case "thermoelastoplastic_radial_return"
29: Running 3 test cases...
29: Entering test module "Integration_2D"
29: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Entering test case "integration_2D"
17: 
17: *** No errors detected
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(1241): Leaving test case "thermoelastoplastic_radial_return"; testing time: 2366179us
17: Leaving test module "MechanicalPhysics"; testing time: 243369903us
17: 
21/50 Test #17: test_mechanical_physics_1 ................   Passed  246.59 sec
test 31
      Start 31: test_integration_2d_device_1

31: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_2d_device"
31: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
31: Test timeout computed to be: 7200
29: 10% completed
29: 20% completed
31: Running 1 test case...
31: Entering test module "Integration_2D_Device"
31: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Entering test case "intregation_2D_device"
29: 30% completed
29: 40% completed
31: 10% completed
29: 50% completed
29: 60% completed
29: 70% completed
31: 20% completed
29: 80% completed
29: 90% completed
31: 30% completed
29: 100% completed
31: 40% completed
29: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Leaving test case "integration_2D"; testing time: 9694714us
29: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Entering test case "integration_2D_ensemble"
31: 50% completed
31: 60% completed
31: 70% completed
29: Starting the main time stepping loop...
31: 80% completed
31: 90% completed
31: 100% completed
31: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Leaving test case "intregation_2D_device"; testing time: 13355588us
31: Leaving test module "Integration_2D_Device"; testing time: 13355940us
31: 
31: *** No errors detected
31: 
22/50 Test #31: test_integration_2d_device_1 .............   Passed   16.21 sec
test 33
      Start 33: test_integration_3d_1

33: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d"
33: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
33: Test timeout computed to be: 7200
29: 10% completed
29: 20% completed
33: Running 5 test cases...
33: Entering test module "Integration_3D"
33: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Entering test case "integration_3D"
29: 30% completed
29: 40% completed
29: 50% completed
29: 60% completed
29: 70% completed
29: 80% completed
29: 90% completed
29: 100% completed
29: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Leaving test case "integration_2D_ensemble"; testing time: 37137374us
29: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Entering test case "integration_2D_units"
29: 10% completed
29: 20% completed
29: 30% completed
29: 40% completed
29: 50% completed
29: 60% completed
29: 70% completed
29: 80% completed
29: 90% completed
29: 100% completed
29: 
29: *** No errors detected
29: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Leaving test case "integration_2D_units"; testing time: 10654873us
29: Leaving test module "Integration_2D"; testing time: 57488990us
29: 
23/50 Test #29: test_integration_2d_1 ....................   Passed   60.58 sec
test 35
      Start 35: test_integration_3d_amr_1

35: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_amr"
35: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
35: Test timeout computed to be: 7200
13: 30% completed
35: Running 2 test cases...
35: Entering test module "Integration_3D_AMR"
35: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Entering test case "integration_3D_amr"
35: 10% completed
35: 20% completed
35: 30% completed
35: 40% completed
35: 50% completed
35: 60% completed
35: 70% completed
35: 80% completed
35: 90% completed
35: 100% completed
35: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Leaving test case "integration_3D_amr"; testing time: 46761728us
35: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Entering test case "integration_3D_amr_refine_coarsen"
33: 10% completed
35: 10% completed
33: 20% completed
13: 40% completed
33: 30% completed
35: 20% completed
33: 40% completed
35: 30% completed
33: 50% completed
35: 40% completed
33: 60% completed
33: 70% completed
35: 50% completed
13: 50% completed
33: 80% completed
35: 60% completed
33: 90% completed
35: 70% completed
33: 100% completed
33: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Leaving test case "integration_3D"; testing time: 512971469us
33: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Entering test case "integration_3D_short"
35: 80% completed
35: 90% completed
35: 100% completed
35: 
35: *** No errors detected
35: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Leaving test case "integration_3D_amr_refine_coarsen"; testing time: 458338711us
35: Leaving test module "Integration_3D_AMR"; testing time: 505101211us
35: 
24/50 Test #35: test_integration_3d_amr_1 ................   Passed  510.05 sec
test 37
      Start 37: test_integration_3d_amr_device_1

37: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_amr_device"
37: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
37: Test timeout computed to be: 7200
37: Running 1 test case...
37: Entering test module "Integration_3D_AMR"
37: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Entering test case "integration_3D_amr_device"
37: 10% completed
13: 60% completed
37: 20% completed
37: 30% completed
37: 40% completed
37: 50% completed
13: 70% completed
37: 60% completed
37: 70% completed
37: 80% completed
37: 90% completed
13: 80% completed
37: 100% completed
37: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Leaving test case "integration_3D_amr_device"; testing time: 468260167us
37: Leaving test module "Integration_3D_AMR"; testing time: 468261944us
37: 
37: *** No errors detected
37: 
25/50 Test #37: test_integration_3d_amr_device_1 .........   Passed  472.21 sec
test 39
      Start 39: test_integration_da_augmented_1

39: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da_augmented"
39: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
39: Test timeout computed to be: 7200
39: Running 1 test case...
39: Entering test module "Integration_Data_Assimilation_Augmented"
39: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Entering test case "integration_3D_data_assimilation_augmented"
39: Reading the experimental log file...
39: Done. Log entries found for 1 camera(s), with 2 frame(s).
39: Starting the main time stepping loop...
39: 10% completed
39: 20% completed
39: 30% completed
39: 40% completed
39: 50% completed
39: 60% completed
39: 70% completed
13: 90% completed
39: Performing data assimilation at time 0.04...
39: Rank: 0 | Old parameters for member 0: 0.413453 
39: Rank: 0 | Old parameters for member 1: 0.385362 
39: Rank: 0 | Old parameters for member 2: 0.446065 
39: Rank: 0 | Number expt sites mapped to DOFs: 2
39: Getting the perturbed innovation...
39: Applying the Kalman gain...
39: Updating the ensemble members...
39: Done.
39: Rank: 0 | New parameters for member 0: 0.121104 
39: Rank: 0 | New parameters for member 1: 0.142225 
39: Rank: 0 | New parameters for member 2: 0.107206 
39: 80% completed
39: 90% completed
39: 100% completed
39: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Leaving test case "integration_3D_data_assimilation_augmented"; testing time: 226508046us
39: Leaving test module "Integration_Data_Assimilation_Augmented"; testing time: 226509456us
39: 
39: *** No errors detected
39: 
26/50 Test #39: test_integration_da_augmented_1 ..........   Passed  230.11 sec
test 41
      Start 41: test_integration_thermoelastic_1

41: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic"
41: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
41: Test timeout computed to be: 7200
41: Running 2 test cases...
41: Entering test module "Integration_Thermoelastic"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(19): Entering test case "integration_thermoelastic"
13: 100% completed
13: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_device.cc(19): Leaving test case "integration_3D_device"; testing time: 1754778010us
13: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_device.cc(46): Entering test case "integration_3D_checkpoint_restart_device"
13: 10% completed
13: 20% completed
13: 30% completed
13: 40% completed
13: 50% completed
13: 60% completed
13: 70% completed
33: 10% completed
13: Checkpoint reached
13: 80% completed
13: 90% completed
13: 100% completed
13: Restarting from file
13: 80% completed
13: 90% completed
13: 100% completed
13: 
13: *** No errors detected
13: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_device.cc(46): Leaving test case "integration_3D_checkpoint_restart_device"; testing time: 590131823us
13: Leaving test module "Integration_3D_Device"; testing time: 2344910256us
13: 
27/50 Test #13: test_integration_3d_device_1 .............   Passed  2348.51 sec
test 43
      Start 43: test_material_deposition_1

43: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_material_deposition"
43: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
43: Test timeout computed to be: 7200
43: Running 11 test cases...
43: Entering test module "MaterialDeposition"
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Entering test case "read_material_deposition_file_2d"
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Leaving test case "read_material_deposition_file_2d"; testing time: 43709us
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Entering test case "read_material_deposition_file_3d"
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Leaving test case "read_material_deposition_file_3d"; testing time: 36913us
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(134): Entering test case "get_elements_to_activate_2d"
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(134): Leaving test case "get_elements_to_activate_2d"; testing time: 247218us
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(195): Entering test case "get_elements_to_activate_3d"
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(195): Leaving test case "get_elements_to_activate_3d"; testing time: 771918us
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Entering test case "material_deposition"
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Leaving test case "material_deposition"; testing time: 43371475us
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Entering test case "deposition_from_scan_path_2d"
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Leaving test case "deposition_from_scan_path_2d"; testing time: 30587us
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Entering test case "deposition_from_scan_path_3d"
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Leaving test case "deposition_from_scan_path_3d"; testing time: 231us
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Entering test case "deposition_from_L_scan_path_3d"
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Leaving test case "deposition_from_L_scan_path_3d"; testing time: 32427us
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Entering test case "deposition_from_diagonal_scan_path_3d"
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Leaving test case "deposition_from_diagonal_scan_path_3d"; testing time: 39584us
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Entering test case "merge_multiple_deposition_paths"
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Leaving test case "merge_multiple_deposition_paths"; testing time: 144us
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Entering test case "deposition_quaternion_straight_line"
43: 
43: *** No errors detected
43: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Leaving test case "deposition_quaternion_straight_line"; testing time: 39907us
43: Leaving test module "MaterialDeposition"; testing time: 44616323us
43: 
28/50 Test #43: test_material_deposition_1 ...............   Passed   48.61 sec
test 45
      Start 45: test_microstructure_1

45: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_microstructure"
45: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
45: Test timeout computed to be: 7200
45: Running 1 test case...
45: Entering test module "MicroStructure"
45: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Entering test case "G_and_R"
45: 
45: *** No errors detected
45: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Leaving test case "G_and_R"; testing time: 1011463us
45: Leaving test module "MicroStructure"; testing time: 1011520us
45: 
29/50 Test #45: test_microstructure_1 ....................   Passed    5.53 sec
test 47
      Start 47: test_thermal_physics_1

47: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_physics"
47: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
47: Test timeout computed to be: 7200
47: Running 7 test cases...
47: Entering test module "ThermalPhysics"
47: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Entering test case "thermal_2d_explicit_host"
47: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Leaving test case "thermal_2d_explicit_host"; testing time: 650264us
47: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Entering test case "thermal_2d_manufactured_solution_host"
47: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Leaving test case "thermal_2d_manufactured_solution_host"; testing time: 627415us
47: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Entering test case "initial_temperature_host"
47: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Leaving test case "initial_temperature_host"; testing time: 612354us
47: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Entering test case "energy_conservation_host"
47: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Leaving test case "energy_conservation_host"; testing time: 18819363us
47: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Entering test case "radiation_bcs_host"
47: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Leaving test case "radiation_bcs_host"; testing time: 8815204us
47: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Entering test case "convection_bcs_host"
33: 20% completed
47: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Leaving test case "convection_bcs_host"; testing time: 263088122us
47: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Entering test case "reference_temperature_host"
47: 
47: *** No errors detected
47: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Leaving test case "reference_temperature_host"; testing time: 1385823us
47: Leaving test module "ThermalPhysics"; testing time: 293999908us
47: 
30/50 Test #47: test_thermal_physics_1 ...................   Passed  299.14 sec
test 49
      Start 49: test_ensemble_management_1

49: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_ensemble_management"
49: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
49: Test timeout computed to be: 7200
49: Running 1 test case...
49: Entering test module "EnsembleManagement"
49: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Entering test case "database_ensemble"
49: 
49: *** No errors detected
49: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Leaving test case "database_ensemble"; testing time: 232313us
49: Leaving test module "EnsembleManagement"; testing time: 232365us
49: 
31/50 Test #49: test_ensemble_management_1 ...............   Passed    5.53 sec
33: 30% completed
33: 40% completed
33: 50% completed
33: 60% completed
41: 10% completed
27: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(44): Leaving test case "connected_components"; testing time: 3880134139us
27: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(144): Entering test case "disconnected_components"
27: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(144): Leaving test case "disconnected_components"; testing time: 194125us
27: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(238): Entering test case "adaptive_mesh_refinement"
27: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(238): Leaving test case "adaptive_mesh_refinement"; testing time: 1936595us
27: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(341): Entering test case "vertex_contacts"
27: 
27: *** No errors detected
27: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(341): Leaving test case "vertex_contacts"; testing time: 241458us
27: Leaving test module "Master Test Suite"; testing time: 3882506511us
27: 
32/50 Test #27: test_connected_components_1 ..............   Passed  3887.73 sec
test 28
      Start 28: test_connected_components_2

28: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_connected_components"
28: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
28: Test timeout computed to be: 7200
28: Running 4 test cases...
28: Entering test module "Master Test Suite"
28: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(44): Entering test case "connected_components"
28: Running 4 test cases...
28: Entering test module "Master Test Suite"
28: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(44): Entering test case "connected_components"
33: 70% completed
33: 80% completed
33: 90% completed
33: 100% completed
33: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Leaving test case "integration_3D_short"; testing time: 3898353654us
33: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Entering test case "integration_3D_five_axis"
41: 20% completed
33: 10% completed
28: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(44): Leaving test case "connected_components"; testing time: 2963021152us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(144): Entering test case "disconnected_components"
28: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(44): Leaving test case "connected_components"; testing time: 2962738977us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(144): Entering test case "disconnected_components"
28: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(144): Leaving test case "disconnected_components"; testing time: 252939us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(238): Entering test case "adaptive_mesh_refinement"
28: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(144): Leaving test case "disconnected_components"; testing time: 198471us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(238): Entering test case "adaptive_mesh_refinement"
28: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(238): Leaving test case "adaptive_mesh_refinement"; testing time: 1338199us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(341): Entering test case "vertex_contacts"
28: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(238): Leaving test case "adaptive_mesh_refinement"; testing time: 1369250us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(341): Entering test case "vertex_contacts"
28: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(341): Leaving test case "vertex_contacts"; testing time: 275578us
28: Leaving test module "Master Test Suite"; testing time: 2964888059us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_connected_components.cc(341): Leaving test case "vertex_contacts"; testing time: 244490us
28: Leaving test module "Master Test Suite"; testing time: 2964551383us
28: 
28: *** No errors detected
28: 
28: *** No errors detected
28: 
33/50 Test #28: test_connected_components_2 ..............   Passed  2968.62 sec
test 30
      Start 30: test_integration_2d_2

30: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_2d"
30: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
30: Test timeout computed to be: 7200
30: Running 3 test cases...
30: Entering test module "Integration_2D"
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Entering test case "integration_2D"
30: Running 3 test cases...
30: Entering test module "Integration_2D"
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Entering test case "integration_2D"
30: 10% completed
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30: 50% completed
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30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Leaving test case "integration_2D"; testing time: 6799606us
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Entering test case "integration_2D_ensemble"
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Leaving test case "integration_2D"; testing time: 6494974us
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Entering test case "integration_2D_ensemble"
30: Starting the main time stepping loop...
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Leaving test case "integration_2D_ensemble"; testing time: 3216945us
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Entering test case "integration_2D_units"
30: 10% completed
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30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Leaving test case "integration_2D_ensemble"; testing time: 15448651us
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Entering test case "integration_2D_units"
30: 10% completed
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30: 30% completed
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30: 50% completed
30: 60% completed
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30: 100% completed
30: 
30: *** No errors detected
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Leaving test case "integration_2D_units"; testing time: 6673341us
30: Leaving test module "Integration_2D"; testing time: 28618766us
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Leaving test case "integration_2D_units"; testing time: 18916544us
30: Leaving test module "Integration_2D"; testing time: 28934112us
30: 
30: *** No errors detected
30: 
34/50 Test #30: test_integration_2d_2 ....................   Passed   34.00 sec
test 32
      Start 32: test_integration_2d_device_2

32: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_2d_device"
32: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
32: Test timeout computed to be: 7200
32: Running 1 test case...
32: Entering test module "Integration_2D_Device"
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Entering test case "intregation_2D_device"
32: Running 1 test case...
32: Entering test module "Integration_2D_Device"
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Entering test case "intregation_2D_device"
32: 10% completed
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32: 50% completed
32: 60% completed
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32: 90% completed
32: 100% completed
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Leaving test case "intregation_2D_device"; testing time: 8112891us
32: Leaving test module "Integration_2D_Device"; testing time: 8113216us
32: 
32: *** No errors detected
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Leaving test case "intregation_2D_device"; testing time: 8435076us
32: Leaving test module "Integration_2D_Device"; testing time: 8435420us
32: 
32: *** No errors detected
32: 
35/50 Test #32: test_integration_2d_device_2 .............   Passed   11.40 sec
test 34
      Start 34: test_integration_3d_2

34: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d"
34: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
34: Test timeout computed to be: 7200
34: Running 5 test cases...
34: Entering test module "Integration_3D"
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Entering test case "integration_3D"
34: Running 5 test cases...
34: Entering test module "Integration_3D"
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Entering test case "integration_3D"
41: 30% completed
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34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Leaving test case "integration_3D"; testing time: 199791249us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Entering test case "integration_3D_short"
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Leaving test case "integration_3D"; testing time: 199443358us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Entering test case "integration_3D_short"
36/50 Test #33: test_integration_3d_1 ....................***Timeout 7200.11 sec
34: 10% completed
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34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Leaving test case "integration_3D_short"; testing time: 1338237260us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Entering test case "integration_3D_five_axis"
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Leaving test case "integration_3D_short"; testing time: 1338366456us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Entering test case "integration_3D_five_axis"
37/50 Test #41: test_integration_thermoelastic_1 .........***Timeout 7200.11 sec
test 36
      Start 36: test_integration_3d_amr_2

36: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_amr"
36: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
36: Test timeout computed to be: 7200
36: Running 2 test cases...
36: Entering test module "Integration_3D_AMR"
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Entering test case "integration_3D_amr"
36: Running 2 test cases...
36: Entering test module "Integration_3D_AMR"
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Entering test case "integration_3D_amr"
36: 10% completed
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36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Leaving test case "integration_3D_amr"; testing time: 14582688us
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Entering test case "integration_3D_amr_refine_coarsen"
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Leaving test case "integration_3D_amr"; testing time: 14560497us
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Entering test case "integration_3D_amr_refine_coarsen"
36: 10% completed
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36: 30% completed
36: 40% completed
36: 50% completed
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36: 
36: *** No errors detected
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Leaving test case "integration_3D_amr_refine_coarsen"; testing time: 141676919us
36: Leaving test module "Integration_3D_AMR"; testing time: 156260263us
36: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Leaving test case "integration_3D_amr_refine_coarsen"; testing time: 141676818us
36: Leaving test module "Integration_3D_AMR"; testing time: 156238103us
36: 
36: *** No errors detected
36: 
38/50 Test #36: test_integration_3d_amr_2 ................   Passed  163.96 sec
test 38
      Start 38: test_integration_3d_amr_device_2

38: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_amr_device"
38: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
38: Test timeout computed to be: 7200
38: Running 1 test case...
38: Entering test module "Integration_3D_AMR"
38: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Entering test case "integration_3D_amr_device"
38: Running 1 test case...
38: Entering test module "Integration_3D_AMR"
38: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Entering test case "integration_3D_amr_device"
38: 10% completed
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38: 
38: *** No errors detected
38: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Leaving test case "integration_3D_amr_device"; testing time: 126280541us
38: Leaving test module "Integration_3D_AMR"; testing time: 126280868us
38: 
38: *** No errors detected
38: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Leaving test case "integration_3D_amr_device"; testing time: 126380947us
38: Leaving test module "Integration_3D_AMR"; testing time: 126381370us
38: 
39/50 Test #38: test_integration_3d_amr_device_2 .........   Passed  133.95 sec
test 40
      Start 40: test_integration_da_augmented_2

40: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da_augmented"
40: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
40: Test timeout computed to be: 7200
40: Running 1 test case...
40: Entering test module "Integration_Data_Assimilation_Augmented"
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Entering test case "integration_3D_data_assimilation_augmented"
40: Running 1 test case...
40: Entering test module "Integration_Data_Assimilation_Augmented"
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Entering test case "integration_3D_data_assimilation_augmented"
40: Reading the experimental log file...
40: Done. Log entries found for 1 camera(s), with 2 frame(s).
40: Starting the main time stepping loop...
40: 10% completed
40: 20% completed
40: 30% completed
40: Rank: 1 | Old parameters for member 2: 0.446065 
40: Rank: 1 | Number expt sites mapped to DOFs: 2
40: 40% completed
40: 50% completed
40: 60% completed
40: 70% completed
40: Performing data assimilation at time 0.04...
40: Rank: 0 | Old parameters for member 0: 0.413453 
40: Rank: 0 | Old parameters for member 1: 0.385362 
40: Rank: 0 | Number expt sites mapped to DOFs: 2
40: Getting the perturbed innovation...
40: Applying the Kalman gain...
40: Updating the ensemble members...
40: Rank: 1 | New parameters for member 2: 0.107206 
40: Done.
40: Rank: 0 | New parameters for member 0: 0.121104 
40: Rank: 0 | New parameters for member 1: 0.142225 
40: 80% completed
40: 90% completed
40: 100% completed
40: 
40: *** No errors detected
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Leaving test case "integration_3D_data_assimilation_augmented"; testing time: 73465455us
40: Leaving test module "Integration_Data_Assimilation_Augmented"; testing time: 73465809us
40: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Leaving test case "integration_3D_data_assimilation_augmented"; testing time: 73497688us
40: Leaving test module "Integration_Data_Assimilation_Augmented"; testing time: 73498083us
40: 
40: *** No errors detected
40: 
40/50 Test #40: test_integration_da_augmented_2 ..........   Passed   82.86 sec
test 42
      Start 42: test_integration_thermoelastic_2

42: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic"
42: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
42: Test timeout computed to be: 7200
34: 10% completed
42: Running 2 test cases...
42: Entering test module "Integration_Thermoelastic"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(19): Entering test case "integration_thermoelastic"
42: Running 2 test cases...
42: Entering test module "Integration_Thermoelastic"
42: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(19): Entering test case "integration_thermoelastic"
42: 
42: --------------------------------------------------------
42: An error occurred in line <1581> of file </opt/dealii/include/deal.II/lac/la_parallel_vector.h> in function
42:     Number dealii::LinearAlgebra::distributed::Vector<Number, MemorySpace>::operator()(size_type) const [with Number = double; MemorySpace = dealii::MemorySpace::Host; size_type = long unsigned int]
42: The violated condition was: 
42:     partitioner->in_local_range(global_index) || vector_is_ghosted == true
42: Additional information: 
42:     You tried to read a ghost element of this vector, but it has not
42:     imported its ghost values.
42: 
42: Stacktrace:
42: -----------
42: #0  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: dealii::LinearAlgebra::distributed::Vector<double, dealii::MemorySpace::Host>::operator()(unsigned long) const
42: #1  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: dealii::LinearAlgebra::distributed::Vector<double, dealii::MemorySpace::Host>::operator[](unsigned long) const
42: #2  /opt/dealii/lib/libdeal_II.g.so.9.6.2: dealii::LinearAlgebra::distributed::Vector<double, dealii::MemorySpace::Host>::extract_subvector_to(dealii::ArrayView<unsigned long const, dealii::MemorySpace::Host> const&, dealii::ArrayView<double, dealii::MemorySpace::Host>&) const
42: #3  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: void dealii::DoFCellAccessor<3, 3, false>::get_dof_values<double, double*>(dealii::ReadVector<double> const&, double*, double*) const
42: #4  /opt/dealii/lib/libdeal_II.g.so.9.6.2: void dealii::DoFCellAccessor<3, 3, false>::get_dof_values<dealii::ReadVector<double>, double>(dealii::ReadVector<double> const&, dealii::Vector<double>&) const
42: #5  /opt/dealii/lib/libdeal_II.g.so.9.6.2: void dealii::DoFCellAccessor<3, 3, false>::get_interpolated_dof_values<double>(dealii::ReadVector<double> const&, dealii::Vector<double>&, unsigned short) const
42: #6  /opt/dealii/lib/libdeal_II.g.so.9.6.2: void dealii::FEValuesBase<3, 3>::CellIteratorWrapper::get_interpolated_dof_values<double>(dealii::ReadVector<double> const&, dealii::Vector<double>&) const
42: #7  /opt/dealii/lib/libdeal_II.g.so.9.6.2: void dealii::FEValuesViews::Vector<3, 3>::get_function_symmetric_gradients<double>(dealii::ReadVector<double> const&, std::vector<dealii::ProductType<double, dealii::SymmetricTensor<2, 3, double> >::type, std::allocator<dealii::ProductType<double, dealii::SymmetricTensor<2, 3, double> >::type> >&) const
42: #8  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: adamantine::MechanicalPhysics<3, -1, 3, adamantine::SolidLiquidPowder, dealii::MemorySpace::Host>::evaluate_trial_state(dealii::LinearAlgebra::distributed::Vector<double, dealii::MemorySpace::Host> const&)
42: #9  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: adamantine::MechanicalPhysics<3, -1, 3, adamantine::SolidLiquidPowder, dealii::MemorySpace::Host>::evaluate_residual(dealii::LinearAlgebra::distributed::Vector<double, dealii::MemorySpace::Host> const&)
42: #10  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: adamantine::MechanicalPhysics<3, -1, 3, adamantine::SolidLiquidPowder, dealii::MemorySpace::Host>::solve()
42: #11  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: std::pair<dealii::LinearAlgebra::distributed::Vector<double, dealii::MemorySpace::Host>, dealii::LinearAlgebra::distributed::Vector<double, dealii::MemorySpace::Host> > run<3, -1, 3, adamantine::SolidLiquidPowder, dealii::MemorySpace::Host>(ompi_communicator_t* const&, boost::property_tree::basic_ptree<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::less<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > const&, std::vector<adamantine::Timer, std::allocator<adamantine::Timer> >&)
42: #12  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: integration_thermoelastic::test_method()
42: #13  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: 
42: #14  /var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic: boost::detail::function::void_function_invoker0<void (*)(), void>::invoke(boost::detail::function::function_buffer&)
42: #15  /lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0: 
42: #16  /lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0: boost::execution_monitor::catch_signals(boost::function<int ()> const&)
42: #17  /lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0: boost::execution_monitor::execute(boost::function<int ()> const&)
42: #18  /lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0: boost::execution_monitor::vexecute(boost::function<void ()> const&)
42: #19  /lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0: boost::unit_test::unit_test_monitor_t::execute_and_translate(boost::function<void ()> const&, unsigned long)
42: #20  /lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0: 
42: #21  /lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0: 
42: #22  /lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0: boost::unit_test::framework::run(unsigned long, bool)
42: --------------------------------------------------------
42: 
42: Calling MPI_Abort now.
42: To break execution in a GDB session, execute 'break MPI_Abort' before running. You can also put the following into your ~/.gdbinit:
42:   set breakpoint pending on
42:   break MPI_Abort
42:   set breakpoint pending auto
42: --------------------------------------------------------------------------
42: MPI_ABORT was invoked on rank 1 in communicator MPI_COMM_WORLD
42: with errorcode 255.
42: 
42: NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
42: You may or may not see output from other processes, depending on
42: exactly when Open MPI kills them.
42: --------------------------------------------------------------------------
41/50 Test #42: test_integration_thermoelastic_2 .........***Failed    9.52 sec
test 44
      Start 44: test_material_deposition_2

44: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_material_deposition"
44: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
44: Test timeout computed to be: 7200
44: Running 11 test cases...
44: Entering test module "MaterialDeposition"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Entering test case "read_material_deposition_file_2d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Leaving test case "read_material_deposition_file_2d"; testing time: 12100us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Entering test case "read_material_deposition_file_3d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Leaving test case "read_material_deposition_file_3d"; testing time: 11728us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(134): Test case "get_elements_to_activate_2d" is skipped because precondition failed: the test only works in serial
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(195): Test case "get_elements_to_activate_3d" is skipped because precondition failed: the test only works in serial
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Entering test case "material_deposition"
44: Running 11 test cases...
44: Entering test module "MaterialDeposition"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Entering test case "read_material_deposition_file_2d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Leaving test case "read_material_deposition_file_2d"; testing time: 495us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Entering test case "read_material_deposition_file_3d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Leaving test case "read_material_deposition_file_3d"; testing time: 226us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(134): Test case "get_elements_to_activate_2d" is skipped because precondition failed: the test only works in serial
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(195): Test case "get_elements_to_activate_3d" is skipped because precondition failed: the test only works in serial
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Entering test case "material_deposition"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Leaving test case "material_deposition"; testing time: 16891707us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Entering test case "deposition_from_scan_path_2d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Leaving test case "deposition_from_scan_path_2d"; testing time: 287us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Entering test case "deposition_from_scan_path_3d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Leaving test case "deposition_from_scan_path_3d"; testing time: 221us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Entering test case "deposition_from_L_scan_path_3d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Leaving test case "material_deposition"; testing time: 16822599us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Entering test case "deposition_from_scan_path_2d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Leaving test case "deposition_from_scan_path_2d"; testing time: 348us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Entering test case "deposition_from_scan_path_3d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Leaving test case "deposition_from_scan_path_3d"; testing time: 224us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Entering test case "deposition_from_L_scan_path_3d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Leaving test case "deposition_from_L_scan_path_3d"; testing time: 270us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Entering test case "deposition_from_diagonal_scan_path_3d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Leaving test case "deposition_from_L_scan_path_3d"; testing time: 12016us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Entering test case "deposition_from_diagonal_scan_path_3d"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Leaving test case "deposition_from_diagonal_scan_path_3d"; testing time: 221us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Entering test case "merge_multiple_deposition_paths"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Leaving test case "merge_multiple_deposition_paths"; testing time: 133us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Entering test case "deposition_quaternion_straight_line"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Leaving test case "deposition_from_diagonal_scan_path_3d"; testing time: 16039us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Entering test case "merge_multiple_deposition_paths"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Leaving test case "merge_multiple_deposition_paths"; testing time: 139us
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Entering test case "deposition_quaternion_straight_line"
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Leaving test case "deposition_quaternion_straight_line"; testing time: 680us
44: Leaving test module "MaterialDeposition"; testing time: 16842981us
44: 
44: *** No errors detected
44: 
44: *** No errors detected
44: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Leaving test case "deposition_quaternion_straight_line"; testing time: 12433us
44: Leaving test module "MaterialDeposition"; testing time: 16942779us
44: 
42/50 Test #44: test_material_deposition_2 ...............   Passed   24.85 sec
test 46
      Start 46: test_microstructure_2

46: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_microstructure"
46: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
46: Test timeout computed to be: 7200
46: Running 1 test case...
46: Entering test module "MicroStructure"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Entering test case "G_and_R"
46: Running 1 test case...
46: Entering test module "MicroStructure"
46: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Entering test case "G_and_R"
46: 
46: *** No errors detected
46: Test case G_and_R did not check any assertions
46: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Leaving test case "G_and_R"; testing time: 473174us
46: Leaving test module "MicroStructure"; testing time: 473236us
46: 
46: *** No errors detected
46: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Leaving test case "G_and_R"; testing time: 526917us
46: Leaving test module "MicroStructure"; testing time: 526965us
46: 
43/50 Test #46: test_microstructure_2 ....................   Passed    6.81 sec
test 48
      Start 48: test_thermal_physics_2

48: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_physics"
48: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
48: Test timeout computed to be: 7200
48: Running 7 test cases...
48: Entering test module "ThermalPhysics"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Entering test case "thermal_2d_explicit_host"
48: Running 7 test cases...
48: Entering test module "ThermalPhysics"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Entering test case "thermal_2d_explicit_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Leaving test case "thermal_2d_explicit_host"; testing time: 263053us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Entering test case "thermal_2d_manufactured_solution_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Leaving test case "thermal_2d_explicit_host"; testing time: 349439us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Entering test case "thermal_2d_manufactured_solution_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Leaving test case "thermal_2d_manufactured_solution_host"; testing time: 409270us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Entering test case "initial_temperature_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Leaving test case "thermal_2d_manufactured_solution_host"; testing time: 409056us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Entering test case "initial_temperature_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Leaving test case "initial_temperature_host"; testing time: 250613us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Entering test case "energy_conservation_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Leaving test case "initial_temperature_host"; testing time: 250569us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Entering test case "energy_conservation_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Leaving test case "energy_conservation_host"; testing time: 9470400us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Entering test case "radiation_bcs_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Leaving test case "energy_conservation_host"; testing time: 9470484us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Entering test case "radiation_bcs_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Leaving test case "radiation_bcs_host"; testing time: 4419573us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Entering test case "convection_bcs_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Leaving test case "radiation_bcs_host"; testing time: 4419504us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Entering test case "convection_bcs_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Leaving test case "convection_bcs_host"; testing time: 85910303us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Entering test case "reference_temperature_host"
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Leaving test case "convection_bcs_host"; testing time: 85910493us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Entering test case "reference_temperature_host"
48: 
48: *** No errors detected
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Leaving test case "reference_temperature_host"; testing time: 186009us
48: Leaving test module "ThermalPhysics"; testing time: 100909875us
48: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Leaving test case "reference_temperature_host"; testing time: 237145us
48: Leaving test module "ThermalPhysics"; testing time: 101047575us
48: 
48: *** No errors detected
48: 
44/50 Test #48: test_thermal_physics_2 ...................   Passed  106.58 sec
test 50
      Start 50: test_ensemble_management_2

50: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_ensemble_management"
50: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
50: Test timeout computed to be: 7200
50: Running 1 test case...
50: Entering test module "EnsembleManagement"
50: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Entering test case "database_ensemble"
50: 
50: *** No errors detected
50: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Leaving test case "database_ensemble"; testing time: 70275us
50: Leaving test module "EnsembleManagement"; testing time: 70299us
50: Running 1 test case...
50: Entering test module "EnsembleManagement"
50: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Entering test case "database_ensemble"
50: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Leaving test case "database_ensemble"; testing time: 554us
50: Leaving test module "EnsembleManagement"; testing time: 583us
50: 
50: *** No errors detected
50: 
45/50 Test #50: test_ensemble_management_2 ...............   Passed    8.59 sec
34: 20% completed
34: 30% completed
34: 40% completed
34: 50% completed
34: 60% completed
34: 70% completed
34: 80% completed
34: 90% completed
34: 100% completed
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Leaving test case "integration_3D_five_axis"; testing time: 2693838802us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(117): Entering test case "integration_3D_checkpoint_restart"
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Leaving test case "integration_3D_five_axis"; testing time: 2693987468us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(117): Entering test case "integration_3D_checkpoint_restart"
34: 10% completed
34: 20% completed
34: 30% completed
34: 40% completed
34: 50% completed
34: 60% completed
34: 70% completed
34: Checkpoint reached
34: 80% completed
34: 90% completed
34: 100% completed
34: Restarting from file
34: 80% completed
34: 90% completed
34: 100% completed
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(117): Leaving test case "integration_3D_checkpoint_restart"; testing time: 93518145us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(169): Entering test case "hourglass"
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(117): Leaving test case "integration_3D_checkpoint_restart"; testing time: 93516649us
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(169): Entering test case "hourglass"
34: n_time_step: 1 time: 0 n_dofs (thermal) after mesh refinement: 1172
34: n_time_step: 100 time: 0.99 n_dofs (thermal) after cell activation: 1178
34: 10% completed
34: n_time_step: 101 time: 1 n_dofs (thermal) after cell activation: 1178
34: n_time_step: 124 time: 1.23 n_dofs (thermal) after cell activation: 1181
34: n_time_step: 147 time: 1.46 n_dofs (thermal) after cell activation: 1184
34: n_time_step: 170 time: 1.69 n_dofs (thermal) after cell activation: 1187
34: n_time_step: 171 time: 1.7 n_dofs (thermal) after cell activation: 1187
34: n_time_step: 194 time: 1.93 n_dofs (thermal) after cell activation: 1190
34: 20% completed
34: n_time_step: 217 time: 2.16 n_dofs (thermal) after cell activation: 1193
34: n_time_step: 241 time: 2.4 n_dofs (thermal) after cell activation: 1196
34: n_time_step: 264 time: 2.63 n_dofs (thermal) after cell activation: 1199
34: n_time_step: 287 time: 2.86 n_dofs (thermal) after cell activation: 1202
34: n_time_step: 301 time: 3 n_dofs (thermal) after cell activation: 1204
34: 30% completed
34: n_time_step: 325 time: 3.24 n_dofs (thermal) after cell activation: 1205
34: n_time_step: 348 time: 3.47 n_dofs (thermal) after cell activation: 1206
34: n_time_step: 371 time: 3.7 n_dofs (thermal) after cell activation: 1207
34: n_time_step: 395 time: 3.94 n_dofs (thermal) after cell activation: 1208
34: 40% completed
34: n_time_step: 418 time: 4.17 n_dofs (thermal) after cell activation: 1209
34: n_time_step: 441 time: 4.4 n_dofs (thermal) after cell activation: 1210
34: n_time_step: 465 time: 4.64 n_dofs (thermal) after cell activation: 1211
34: n_time_step: 488 time: 4.87 n_dofs (thermal) after cell activation: 1212
34: 50% completed
34: n_time_step: 507 time: 5.06 n_dofs (thermal) after cell activation: 1216
34: n_time_step: 531 time: 5.3 n_dofs (thermal) after cell activation: 1217
34: n_time_step: 554 time: 5.53 n_dofs (thermal) after cell activation: 1218
34: n_time_step: 577 time: 5.76 n_dofs (thermal) after cell activation: 1219
34: n_time_step: 601 time: 6 n_dofs (thermal) after cell activation: 1220
34: 60% completed
34: n_time_step: 624 time: 6.23 n_dofs (thermal) after cell activation: 1221
34: n_time_step: 647 time: 6.46 n_dofs (thermal) after cell activation: 1222
34: n_time_step: 671 time: 6.7 n_dofs (thermal) after cell activation: 1223
34: n_time_step: 694 time: 6.93 n_dofs (thermal) after cell activation: 1224
34: 70% completed
34: n_time_step: 717 time: 7.16 n_dofs (thermal) after cell activation: 1226
34: n_time_step: 740 time: 7.39 n_dofs (thermal) after cell activation: 1227
34: n_time_step: 763 time: 7.62 n_dofs (thermal) after cell activation: 1228
34: n_time_step: 787 time: 7.86 n_dofs (thermal) after cell activation: 1229
34: 80% completed
34: n_time_step: 810 time: 8.09 n_dofs (thermal) after cell activation: 1230
34: n_time_step: 833 time: 8.32 n_dofs (thermal) after cell activation: 1231
34: n_time_step: 857 time: 8.56 n_dofs (thermal) after cell activation: 1232
34: n_time_step: 880 time: 8.79 n_dofs (thermal) after cell activation: 1233
34: 90% completed
34: n_time_step: 903 time: 9.02 n_dofs (thermal) after cell activation: 1234
34: n_time_step: 927 time: 9.26 n_dofs (thermal) after cell activation: 1235
34: n_time_step: 928 time: 9.27 n_dofs (thermal) after cell activation: 1238
34: n_time_step: 951 time: 9.5 n_dofs (thermal) after cell activation: 1239
34: n_time_step: 975 time: 9.74 n_dofs (thermal) after cell activation: 1240
34: n_time_step: 998 time: 9.97 n_dofs (thermal) after cell activation: 1241
34: 100% completed
34: Test case hourglass did not check any assertions
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(169): Leaving test case "hourglass"; testing time: 2177882608us
34: Leaving test module "Integration_3D"; testing time: 6503052348us
34: 
34: *** No errors detected
34: Test case hourglass did not check any assertions
34: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(169): Leaving test case "hourglass"; testing time: 2177911079us
34: Leaving test module "Integration_3D"; testing time: 6503447592us
34: 
34: *** No errors detected
34: 
46/50 Test #34: test_integration_3d_2 ....................   Passed  6507.63 sec
test 3
      Start  3: test_integration_da_3

3: Test command: /usr/bin/mpiexec "-n" "3" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da"
3: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
3: Test timeout computed to be: 7200
3: Running 3 test cases...
3: Entering test module "Integration_Data_Assimilation"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
3: Running 3 test cases...
3: Entering test module "Integration_Data_Assimilation"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
3: Running 3 test cases...
3: Entering test module "Integration_Data_Assimilation"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Starting the main time stepping loop...
3: 10% completed
3: 20% completed
3: 30% completed
3: 40% completed
3: Rank: 2 | Old parameters for member 2: 
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 1 | Old parameters for member 1: 
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 50% completed
3: 60% completed
3: Rank: 2 | Old parameters for member 2: 
3: Rank: 1 | Old parameters for member 1: 
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 70% completed
3: 80% completed
3: 90% completed
3: 100% completed
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 2 frame(s).
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: 10% completed
3: 10% completed
3: 10% completed
3: 20% completed
3: 20% completed
3: 20% completed
3: 30% completed
3: 30% completed
3: 30% completed
3: 40% completed
3: 40% completed
3: 40% completed
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.0211...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Updating the ensemble members...
3: Done.
3: Done.
3: Updating the ensemble members...
3: Done.
3: 50% completed
3: 50% completed
3: 50% completed
3: 60% completed
3: 60% completed
3: 60% completed
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.0316...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: Updating the ensemble members...
3: Done.
3: Updating the ensemble members...
3: Done.
3: 70% completed
3: 70% completed
3: 70% completed
3: 80% completed
3: 80% completed
3: 80% completed
3: 90% completed
3: 90% completed
3: 90% completed
3: 100% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 63736424us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 63835543us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 64202335us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: 10% completed
3: 20% completed
3: 30% completed
3: 40% completed
3: 50% completed
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 1 | Old parameters for member 1: 
3: Rank: 2 | Old parameters for member 2: 
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: 70% completed
3: 80% completed
3: 90% completed
3: 100% completed
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: 10% completed
3: 10% completed
3: 10% completed
3: 20% completed
3: 20% completed
3: 20% completed
3: 30% completed
3: 30% completed
3: 30% completed
3: 40% completed
3: 40% completed
3: 40% completed
3: 50% completed
3: 50% completed
3: 50% completed
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: 70% completed
3: 70% completed
3: 70% completed
3: 80% completed
3: 80% completed
3: 80% completed
3: 90% completed
3: 90% completed
3: 90% completed
3: 100% completed
3: 100% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2870278us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2461730us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2822742us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: 10% completed
3: 20% completed
3: 30% completed
3: 40% completed
3: 50% completed
3: Rank: 1 | Old parameters for member 1: 
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 2 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 1 | Number expt sites mapped to DOFs: 1
3: Rank: 2 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: 70% completed
3: 80% completed
3: 90% completed
3: 100% completed
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Reading the experimental log file...
3: Done. Log entries found for 1 camera(s), with 1 frame(s).
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: Starting the main time stepping loop...
3: 10% completed
3: 10% completed
3: 10% completed
3: 20% completed
3: 20% completed
3: 20% completed
3: 30% completed
3: 30% completed
3: 30% completed
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3: 40% completed
3: 40% completed
3: 50% completed
3: 50% completed
3: 50% completed
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Performing data assimilation at time 0.12...
3: Rank: 0 | Old parameters for member 0: 
3: Rank: 0 | Old parameters for member 1: 
3: Rank: 0 | Old parameters for member 2: 
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Rank: 0 | Number expt sites mapped to DOFs: 1
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Getting the perturbed innovation...
3: Applying the Kalman gain...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Updating the ensemble members...
3: Updating the ensemble members...
3: Done.
3: 60% completed
3: Done.
3: 60% completed
3: 70% completed
3: 70% completed
3: 70% completed
3: 80% completed
3: 80% completed
3: 80% completed
3: 90% completed
3: 90% completed
3: 90% completed
3: 100% completed
3: 100% completed
3: 100% completed
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2517857us
3: Leaving test module "Integration_Data_Assimilation"; testing time: 69182065us
3: 
3: *** No errors detected
3: 
3: *** No errors detected
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2580252us
3: Leaving test module "Integration_Data_Assimilation"; testing time: 69187079us
3: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2532439us
3: Leaving test module "Integration_Data_Assimilation"; testing time: 69190843us
3: 
3: *** No errors detected
3: 
47/50 Test  #3: test_integration_da_3 ....................   Passed   70.62 sec
test 4
      Start  4: test_integration_da_6

4: Test command: /usr/bin/mpiexec "-n" "6" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da"
4: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
4: Test timeout computed to be: 7200
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Running 3 test cases...
4: Entering test module "Integration_Data_Assimilation"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Starting the main time stepping loop...
4: 10% completed
4: 20% completed
4: 30% completed
4: 40% completed
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 2 | Old parameters for member 1: 
4: Rank: 1 | Old parameters for member 0: 
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 50% completed
4: 60% completed
4: Rank: 2 | Old parameters for member 1: 
4: Rank: 3 | Old parameters for member 1: 
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 1 | Old parameters for member 0: 
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 70% completed
4: 80% completed
4: 90% completed
4: 100% completed
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 2 frame(s).
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.0211...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Done.
4: Done.
4: Done.
4: Updating the ensemble members...
4: Done.
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 50% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: 60% completed
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.0316...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Done.
4: Done.
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Done.
4: Done.
4: Done.
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 100% completed
4: 100% completed
4: 100% completed
4: 100% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58299597us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58381128us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58417841us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58442245us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58499796us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 58559767us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: 10% completed
4: 20% completed
4: 30% completed
4: 40% completed
4: 50% completed
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 2 | Old parameters for member 1: 
4: Rank: 1 | Old parameters for member 0: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 5 | Old parameters for member 2: 
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: 80% completed
4: 90% completed
4: 100% completed
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: 10% completed
4: 10% completed
4: 20% completed
4: 10% completed
4: 10% completed
4: 10% completed
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4: 30% completed
4: 20% completed
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4: 40% completed
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4: 40% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 50% completed
4: 40% completed
4: 50% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: 50% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: 50% completed
4: 50% completed
4: 50% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: 80% completed
4: 70% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 80% completed
4: 90% completed
4: 80% completed
4: Updating the ensemble members...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Done.
4: 60% completed
4: 90% completed
4: 70% completed
4: 90% completed
4: 70% completed
4: 70% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2638620us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2669771us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2763580us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: 100% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2894805us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2733669us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 2784884us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: 10% completed
4: 20% completed
4: 30% completed
4: 40% completed
4: 50% completed
4: Rank: 2 | Old parameters for member 1: 
4: Rank: 3 | Old parameters for member 1: 
4: Rank: 4 | Old parameters for member 2: 
4: Rank: 5 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 1 | Old parameters for member 0: 
4: Rank: 3 | Number expt sites mapped to DOFs: 1
4: Rank: 2 | Number expt sites mapped to DOFs: 1
4: Rank: 5 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 1 | Number expt sites mapped to DOFs: 1
4: Rank: 4 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: 80% completed
4: 90% completed
4: 100% completed
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Reading the experimental log file...
4: Done. Log entries found for 1 camera(s), with 1 frame(s).
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: Starting the main time stepping loop...
4: 10% completed
4: 10% completed
4: 10% completed
4: 10% completed
4: 20% completed
4: 10% completed
4: 10% completed
4: 20% completed
4: 20% completed
4: 20% completed
4: 30% completed
4: 20% completed
4: 20% completed
4: 30% completed
4: 30% completed
4: 40% completed
4: 30% completed
4: 30% completed
4: 30% completed
4: 40% completed
4: 40% completed
4: 50% completed
4: 40% completed
4: 40% completed
4: 40% completed
4: 50% completed
4: 50% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: 50% completed
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: 50% completed
4: 50% completed
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Performing data assimilation at time 0.12...
4: Rank: 0 | Old parameters for member 0: 
4: Rank: 0 | Old parameters for member 1: 
4: Rank: 0 | Old parameters for member 2: 
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Rank: 0 | Number expt sites mapped to DOFs: 1
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Getting the perturbed innovation...
4: Applying the Kalman gain...
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 70% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: Updating the ensemble members...
4: Done.
4: 60% completed
4: 80% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 70% completed
4: 90% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 80% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 90% completed
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2675033us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 63731624us
4: 
4: *** No errors detected
4: 100% completed
4: 100% completed
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2678705us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 63790840us
4: 
4: *** No errors detected
4: 100% completed
4: 100% completed
4: 
4: *** No errors detected
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2689735us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 63834594us
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2559540us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 63853136us
4: 
4: *** No errors detected
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2659412us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 63853932us
4: 
4: *** No errors detected
4: 
4: *** No errors detected
4: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 2578453us
4: Leaving test module "Integration_Data_Assimilation"; testing time: 63863270us
4: 
48/50 Test  #4: test_integration_da_6 ....................   Passed   65.85 sec
test 7
      Start  7: test_closest_source_point_adaptation_3

7: Test command: /usr/bin/mpiexec "-n" "3" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_closest_source_point_adaptation"
7: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
7: Test timeout computed to be: 7200
7: Running 1 test case...
7: Entering test module "ClosestSourcePointAdaptation"
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
7: Running 1 test case...
7: Entering test module "ClosestSourcePointAdaptation"
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
7: Running 1 test case...
7: Entering test module "ClosestSourcePointAdaptation"
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
7: 
7: *** No errors detected
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 7006660us
7: Leaving test module "ClosestSourcePointAdaptation"; testing time: 7006717us
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 7007855us
7: 
7: *** No errors detected
7: Leaving test module "ClosestSourcePointAdaptation"; testing time: 7007908us
7: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 7009673us
7: Leaving test module "ClosestSourcePointAdaptation"; testing time: 7009746us
7: 
7: *** No errors detected
7: 
49/50 Test  #7: test_closest_source_point_adaptation_3 ...   Passed    8.37 sec
test 8
      Start  8: test_closest_source_point_adaptation_6

8: Test command: /usr/bin/mpiexec "-n" "6" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_closest_source_point_adaptation"
8: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
8: Test timeout computed to be: 7200
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: Running 1 test case...
8: Entering test module "ClosestSourcePointAdaptation"
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
8: 
8: *** No errors detected
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4410232us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4410276us
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4372269us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4372333us
8: 
8: *** No errors detected
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4375244us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4375300us
8: 
8: *** No errors detected
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4372380us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4372443us
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4377544us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4377613us
8: 
8: 
8: *** No errors detected
8: *** No errors detected
8: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 4412496us
8: Leaving test module "ClosestSourcePointAdaptation"; testing time: 4412540us
8: 
8: *** No errors detected
8: 
50/50 Test  #8: test_closest_source_point_adaptation_6 ...   Passed    6.40 sec

The following tests passed:
	test_closest_source_point_adaptation_1
	test_data_assimilator_1
	test_experimental_data_1
	test_geometry_1
	test_heat_source_1
	test_integration_da_2
	test_closest_source_point_adaptation_2
	test_material_property_device_1
	test_material_property_1
	test_integration_da_1
	test_post_processor_1
	test_quaternion_1
	test_scan_path_1
	test_mechanical_operator_1
	test_thermal_operator_device_1
	test_thermal_operator_1
	test_timer_1
	test_utils_1
	test_validate_input_database_1
	test_thermal_physics_device_1
	test_mechanical_physics_1
	test_integration_2d_device_1
	test_integration_2d_1
	test_integration_3d_amr_1
	test_integration_3d_amr_device_1
	test_integration_da_augmented_1
	test_integration_3d_device_1
	test_material_deposition_1
	test_microstructure_1
	test_thermal_physics_1
	test_ensemble_management_1
	test_connected_components_1
	test_connected_components_2
	test_integration_2d_2
	test_integration_2d_device_2
	test_integration_3d_amr_2
	test_integration_3d_amr_device_2
	test_integration_da_augmented_2
	test_material_deposition_2
	test_microstructure_2
	test_thermal_physics_2
	test_ensemble_management_2
	test_integration_3d_2
	test_integration_da_3
	test_integration_da_6
	test_closest_source_point_adaptation_3
	test_closest_source_point_adaptation_6

94% tests passed, 3 tests failed out of 50

Total Test time (real) = 13949.64 sec

The following tests FAILED:
	 33 - test_integration_3d_1 (Timeout)
	 41 - test_integration_thermoelastic_1 (Timeout)
	 42 - test_integration_thermoelastic_2 (Failed)
Errors while running CTest
Output from these tests are in: /var/jenkins/workspace/adamantine-nightly/build/Testing/Temporary/LastTest.log
Use "--rerun-failed --output-on-failure" to re-run the failed cases verbosely.
[Pipeline] }
[Pipeline] // dir
Post stage
[Pipeline] xunit
INFO: Processing CTest-Version 3.x (default)
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
$ docker stop --time=1 0bdb1a2a33e874bb66489053bf3379ab63609147182fb0a9a68ee4bc5325e804
INFO: [CTest-Version 3.x (default)] - 1 test report file(s) were found with the pattern 'build/Testing/**/Test.xml' relative to '/var/jenkins/workspace/adamantine-nightly' for the testing framework 'CTest-Version 3.x (default)'.
$ docker rm -f --volumes 0bdb1a2a33e874bb66489053bf3379ab63609147182fb0a9a68ee4bc5325e804
[Pipeline] // withDockerContainer
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
Failed in branch CUDA
[Pipeline] // parallel
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // timeout
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] End of Pipeline
Also:   org.jenkinsci.plugins.workflow.actions.ErrorAction$ErrorId: a06188a7-9c99-41fa-ba25-5e59f96b4057
Also:   	Also:   org.jenkinsci.plugins.workflow.actions.ErrorAction$ErrorId: 9462530a-0dbd-4398-8e62-9f2ff8c15448
hudson.AbortException: script returned exit code 8
		at PluginClassLoader for workflow-durable-task-step//org.jenkinsci.plugins.workflow.steps.durable_task.DurableTaskStep$Execution.handleExit(DurableTaskStep.java:689)
		at PluginClassLoader for workflow-durable-task-step//org.jenkinsci.plugins.workflow.steps.durable_task.DurableTaskStep$Execution.check(DurableTaskStep.java:625)
		at PluginClassLoader for workflow-durable-task-step//org.jenkinsci.plugins.workflow.steps.durable_task.DurableTaskStep$Execution.run(DurableTaskStep.java:566)
		at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Unknown Source)
		at java.base/java.util.concurrent.FutureTask.run(Unknown Source)
		at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(Unknown Source)
hudson.remoting.ChannelClosedException: Channel "unknown": Protocol stack cannot write data anymore. It is not open for write
	at org.jenkinsci.remoting.protocol.impl.ChannelApplicationLayer$ByteBufferCommandTransport.write(ChannelApplicationLayer.java:338)
	at hudson.remoting.AbstractByteBufferCommandTransport.write(AbstractByteBufferCommandTransport.java:336)
	at hudson.remoting.Channel.send(Channel.java:829)
	at hudson.remoting.Request.call(Request.java:168)
	at hudson.remoting.Channel.call(Channel.java:1107)
	at hudson.FilePath.act(FilePath.java:1245)
	at hudson.FilePath.act(FilePath.java:1234)
	at hudson.FilePath.mkdirs(FilePath.java:1425)
	at PluginClassLoader for git//hudson.plugins.git.GitSCM.createClient(GitSCM.java:843)
	at PluginClassLoader for git//hudson.plugins.git.GitSCM._checkout(GitSCM.java:1299)
	at PluginClassLoader for git//hudson.plugins.git.GitSCM.checkout(GitSCM.java:1277)
	at PluginClassLoader for workflow-scm-step//org.jenkinsci.plugins.workflow.steps.scm.SCMStep.checkout(SCMStep.java:136)
	at PluginClassLoader for workflow-scm-step//org.jenkinsci.plugins.workflow.steps.scm.SCMStep$StepExecutionImpl.run(SCMStep.java:101)
	at PluginClassLoader for workflow-scm-step//org.jenkinsci.plugins.workflow.steps.scm.SCMStep$StepExecutionImpl.run(SCMStep.java:88)
	at PluginClassLoader for workflow-step-api//org.jenkinsci.plugins.workflow.steps.SynchronousNonBlockingStepExecution.lambda$start$0(SynchronousNonBlockingStepExecution.java:49)
	at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Unknown Source)
	at java.base/java.util.concurrent.FutureTask.run(Unknown Source)
	at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
	at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
	at java.base/java.lang.Thread.run(Unknown Source)
Finished: FAILURE