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Checking out git https://github.com/adamantine-sim/adamantine into /var/jenkins_home/workspace/adamantine-nightly@script/769419fd3c5a9c81c4beafaeab26398461553595cef1aaea2775372c607f95c5 to read ci/nightly.groovy
Selected Git installation does not exist. Using Default
The recommended git tool is: NONE
using credential e7df5eb2-574e-4ec2-98aa-f2e31f069fb4
 > git rev-parse --resolve-git-dir /var/jenkins_home/workspace/adamantine-nightly@script/769419fd3c5a9c81c4beafaeab26398461553595cef1aaea2775372c607f95c5/.git # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/adamantine-sim/adamantine # timeout=10
Fetching upstream changes from https://github.com/adamantine-sim/adamantine
 > git --version # timeout=10
 > git --version # 'git version 2.47.3'
using GIT_ASKPASS to set credentials Jenkins Bruno
 > git fetch --tags --force --progress -- https://github.com/adamantine-sim/adamantine +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
Checking out Revision ea26a4c14d2b83283027c5eacef32715a8b450d8 (refs/remotes/origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f ea26a4c14d2b83283027c5eacef32715a8b450d8 # timeout=10
Commit message: "Merge pull request #508 from Rombur/von_mises"
 > git rev-list --no-walk ea26a4c14d2b83283027c5eacef32715a8b450d8 # timeout=10
[Pipeline] Start of Pipeline
[Pipeline] withEnv
[Pipeline] {
[Pipeline] timeout
Timeout set to expire in 6 hr 0 min
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Test)
[Pipeline] parallel
[Pipeline] { (Branch: CPU)
[Pipeline] { (Branch: CUDA)
[Pipeline] stage
[Pipeline] { (CPU)
[Pipeline] stage
[Pipeline] { (CUDA)
[Pipeline] node
Running on villars06 in /var/jenkins/workspace/adamantine-nightly
[Pipeline] node
Running on waffle_02 in /var/jenkins/workspace/adamantine-nightly
[Pipeline] {
[Pipeline] {
[Pipeline] checkout
Selected Git installation does not exist. Using Default
The recommended git tool is: NONE
[Pipeline] checkout
Selected Git installation does not exist. Using Default
The recommended git tool is: NONE
using credential e7df5eb2-574e-4ec2-98aa-f2e31f069fb4
using credential e7df5eb2-574e-4ec2-98aa-f2e31f069fb4
Fetching changes from the remote Git repository
Fetching changes from the remote Git repository
Checking out Revision ea26a4c14d2b83283027c5eacef32715a8b450d8 (refs/remotes/origin/master)
Commit message: "Merge pull request #508 from Rombur/von_mises"
[Pipeline] withEnv
[Pipeline] {
[Pipeline] isUnix
[Pipeline] withEnv
[Pipeline] {
Checking out Revision ea26a4c14d2b83283027c5eacef32715a8b450d8 (refs/remotes/origin/master)
[Pipeline] sh
+ docker inspect -f . rombur/adamantine-stack:no_gpu-latest

Error: No such object: rombur/adamantine-stack:no_gpu-latest
[Pipeline] isUnix
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
 > git rev-parse --resolve-git-dir /var/jenkins/workspace/adamantine-nightly/.git # timeout=10
 > git config remote.origin.url https://github.com/adamantine-sim/adamantine # timeout=10
Fetching upstream changes from https://github.com/adamantine-sim/adamantine
 > git --version # timeout=10
 > git --version # 'git version 2.43.0'
using GIT_ASKPASS to set credentials Jenkins Bruno
 > git fetch --tags --force --progress -- https://github.com/adamantine-sim/adamantine +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f ea26a4c14d2b83283027c5eacef32715a8b450d8 # timeout=10
 > git rev-parse --resolve-git-dir /var/jenkins/workspace/adamantine-nightly/.git # timeout=10
 > git config remote.origin.url https://github.com/adamantine-sim/adamantine # timeout=10
Fetching upstream changes from https://github.com/adamantine-sim/adamantine
 > git --version # timeout=10
 > git --version # 'git version 2.43.0'
using GIT_ASKPASS to set credentials Jenkins Bruno
 > git fetch --tags --force --progress -- https://github.com/adamantine-sim/adamantine +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f ea26a4c14d2b83283027c5eacef32715a8b450d8 # timeout=10
+ docker pull rombur/adamantine-stack:no_gpu-latest
no_gpu-latest: Pulling from rombur/adamantine-stack
55ec83d4f55f: Pulling fs layer
099ba452fa3d: Pulling fs layer
d1fbec07a2e5: Pulling fs layer
9c6e7aeedfcb: Pulling fs layer
446ca34efb63: Pulling fs layer
92cf3b14fc15: Pulling fs layer
a68c034c7713: Pulling fs layer
3ee1be183cf2: Pulling fs layer
f124fcc6db97: Pulling fs layer
39af785332aa: Pulling fs layer
68186a80352e: Pulling fs layer
1961297b7efe: Pulling fs layer
825dd425294d: Pulling fs layer
aea17b16bd8b: Pulling fs layer
18ceb10bf31b: Pulling fs layer
b4e688b794f2: Pulling fs layer
e60233229ed7: Pulling fs layer
933d5c4bb047: Pulling fs layer
Commit message: "Merge pull request #508 from Rombur/von_mises"
[Pipeline] withEnv
[Pipeline] {
[Pipeline] isUnix
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
1961297b7efe: Download complete
55ec83d4f55f: Download complete
099ba452fa3d: Download complete
3ee1be183cf2: Download complete
92cf3b14fc15: Download complete
+ docker inspect -f . rombur/adamantine-stack:latest
.
[Pipeline] }
446ca34efb63: Download complete
f124fcc6db97: Download complete
d1fbec07a2e5: Download complete
[Pipeline] // withEnv
[Pipeline] withDockerContainer
waffle_02 seems to be running inside container d84c30262a34233376ed6a1e0ed1b38574c22c9ce3fbf53ef360dd15454b057a
$ docker run -t -d -u 0:0 -w /var/jenkins/workspace/adamantine-nightly --volumes-from d84c30262a34233376ed6a1e0ed1b38574c22c9ce3fbf53ef360dd15454b057a -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** rombur/adamantine-stack:latest cat
d1fbec07a2e5: Pull complete
55ec83d4f55f: Pull complete
3ee1be183cf2: Pull complete
92cf3b14fc15: Pull complete
446ca34efb63: Pull complete
aea17b16bd8b: Download complete
18ceb10bf31b: Download complete
825dd425294d: Download complete
a68c034c7713: Download complete
933d5c4bb047: Download complete
e60233229ed7: Download complete
b4e688b794f2: Download complete
$ docker top 83f45545adaa8313f54a4d31d82adb8312898099ccdd406b9f882387beb099b8 -eo pid,comm
ERROR: The container started but didn't run the expected command. Please double check your ENTRYPOINT does execute the command passed as docker run argument, as required by official docker images (see https://github.com/docker-library/official-images#consistency for entrypoint consistency requirements).
Alternatively you can force image entrypoint to be disabled by adding option `--entrypoint=''`.
[Pipeline] {
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
+ rm -rf build
+ mkdir -p build
[Pipeline] dir
Running in /var/jenkins/workspace/adamantine-nightly/build
[Pipeline] {
[Pipeline] sh
39af785332aa: Download complete
68186a80352e: Download complete
-- Using the deal.II-9.6.2 installation found at /opt/dealii
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_add_test.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_initialize_cached_variables.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_invoke_autopilot.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_pickup_tests.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_query_git_information.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_deal_ii_setup_target.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_shell_escape_option_groups.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_target_compile_flags.cmake
-- Include macro /opt/dealii/share/deal.II/macros/macro_target_link_flags.cmake
-- The CXX compiler identification is GNU 13.3.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /opt/trilinos/bin/nvcc_wrapper - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
9c6e7aeedfcb: Download complete
-- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.70.0") found components: chrono program_options timer unit_test_framework 
-- Build type: Debug
-- Configuring done (9.5s)
1961297b7efe: Pull complete
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39af785332aa: Pull complete
-- Generating done (2.2s)
-- Build files have been written to: /var/jenkins/workspace/adamantine-nightly/build
[Pipeline] sh
+ make -j8
[  1%] Copying analytical_1D_transient.py
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[  8%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_bare_plate_L_ensemble.info
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[ 20%] Copying HourGlass_AOP.info
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[ 22%] Copying integration_2d.info
[ 22%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_integration_2d.info
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f124fcc6db97: Pull complete
9c6e7aeedfcb: Pull complete
failed to extract layer (application/vnd.docker.image.rootfs.diff.tar.gzip sha256:68186a80352e8fe25c9ab1c82b8e2ef32b676cfd9b7c923f06e769b4ae8b0a32) to overlayfs as "extract-222108044-D6lp sha256:e853a204aadcca532fef5d65ae143a2cfe7845a9930b1eee135abef4e808f5ca": write /var/lib/containerd/io.containerd.snapshotter.v1.overlayfs/snapshots/4872/fs/usr/lib/x86_64-linux-gnu/libsuperlu_dist.so.8.2.1: no space left on device
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
Failed in branch CPU
[ 27%] Building CXX object source/CMakeFiles/Adamantine.dir/PointCloud.cc.o
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[ 39%] Copying integration_2d_units.info
[ 39%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_integration_2d_units.info
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[ 45%] Copying integration_da_add_material.info
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[ 47%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_integration_da_add_material_expt_ray_0_0.csv
[ 47%] Copying integration_da_add_material_sp.txt
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[ 50%] Copying material_property_polynomial.info
[ 50%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_material_property_polynomial.info
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[ 50%] Built target _var_jenkins_workspace_adamantine-nightly_build_bin_material_property_table.info
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[ 62%] Building CXX object applications/CMakeFiles/activation_visualizer.dir/activation_visualizer.cc.o
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[Pipeline] sh
+ ctest -j4 -V --timeout 7200 --no-compress-output -R test_ -T Test
UpdateCTestConfiguration  from :/var/jenkins/workspace/adamantine-nightly/build/DartConfiguration.tcl
Parse Config file:/var/jenkins/workspace/adamantine-nightly/build/DartConfiguration.tcl
   Site: 83f45545adaa
   Build name: Linux-nvcc_wrapper
Create new tag: 20261023-0510 - Experimental
UpdateCTestConfiguration  from :/var/jenkins/workspace/adamantine-nightly/build/DartConfiguration.tcl
Parse Config file:/var/jenkins/workspace/adamantine-nightly/build/DartConfiguration.tcl
Test project /var/jenkins/workspace/adamantine-nightly/build
Constructing a list of tests
Done constructing a list of tests
Updating test list for fixtures
Added 0 tests to meet fixture requirements
Checking test dependency graph...
Checking test dependency graph end
test 1
      Start  1: test_integration_da_1

1: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da"
1: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
1: Test timeout computed to be: 7200
test 2
      Start  2: test_integration_da_2

2: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da"
2: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
2: Test timeout computed to be: 7200
test 5
      Start  5: test_closest_source_point_adaptation_1

5: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_closest_source_point_adaptation"
5: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
5: Test timeout computed to be: 7200
2: Running 3 test cases...
2: Entering test module "Integration_Data_Assimilation"
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
5: Running 1 test case...
5: Entering test module "ClosestSourcePointAdaptation"
5: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
2: Running 3 test cases...
2: Entering test module "Integration_Data_Assimilation"
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
1: Running 3 test cases...
1: Entering test module "Integration_Data_Assimilation"
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Entering test case "integration_data_assimilation"
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 2 frame(s).
2: Starting the main time stepping loop...
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 2 frame(s).
1: Starting the main time stepping loop...
2: Rank: 1 | Old parameters for member 2: 
2: Rank: 1 | Number expt sites mapped to DOFs: 1
2: 10% completed
1: 10% completed
2: 20% completed
2: 30% completed
1: 20% completed
2: 40% completed
2: Performing data assimilation at time 0.0211...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
1: 30% completed
5: 
5: *** No errors detected
5: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 32536819us
5: Leaving test module "ClosestSourcePointAdaptation"; testing time: 32536861us
5: 
 1/48 Test  #5: test_closest_source_point_adaptation_1 ...   Passed   36.87 sec
test 9
      Start  9: test_data_assimilator_1

9: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_data_assimilator"
9: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
9: Test timeout computed to be: 7200
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
1: 40% completed
2: Updating the ensemble members...
2: Done.
1: Performing data assimilation at time 0.0211...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
9: Running 1 test case...
9: Entering test module "DataAssimilator"
9: /var/jenkins/workspace/adamantine-nightly/tests/test_data_assimilator.cc(948): Entering test case "data_assimilator"
9: Getting the perturbed innovation...
9: Applying the Kalman gain...
9: Updating the ensemble members...
9: Getting the perturbed innovation...
9: Applying the Kalman gain...
9: Updating the ensemble members...
9: 
9: *** No errors detected
9: /var/jenkins/workspace/adamantine-nightly/tests/test_data_assimilator.cc(948): Leaving test case "data_assimilator"; testing time: 989517us
9: Leaving test module "DataAssimilator"; testing time: 989552us
9: 
 2/48 Test  #9: test_data_assimilator_1 ..................   Passed    6.51 sec
test 10
      Start 10: test_experimental_data_1

10: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_experimental_data"
10: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
10: Test timeout computed to be: 7200
2: Rank: 1 | Old parameters for member 2: 
2: Rank: 1 | Number expt sites mapped to DOFs: 1
10: Running 6 test cases...
10: Entering test module "ExperimentaData"
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(22): Entering test case "read_experimental_data_point_cloud_from_file"
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(22): Leaving test case "read_experimental_data_point_cloud_from_file"; testing time: 170249us
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(75): Entering test case "set_vector_with_experimental_data_point_cloud"
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(75): Leaving test case "set_vector_with_experimental_data_point_cloud"; testing time: 137217us
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(138): Entering test case "read_experimental_data_ray_tracing_from_file"
2: 50% completed
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(138): Leaving test case "read_experimental_data_ray_tracing_from_file"; testing time: 169169us
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(199): Entering test case "timestamp"
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(199): Leaving test case "timestamp"; testing time: 23651us
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(225): Entering test case "project_ray_data_on_mesh"
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
2: 60% completed
1: Updating the ensemble members...
1: Done.
2: Performing data assimilation at time 0.0316...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
1: 50% completed
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
1: 60% completed
2: 70% completed
1: Performing data assimilation at time 0.0316...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
2: 80% completed
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
2: 90% completed
1: Updating the ensemble members...
1: Done.
2: 100% completed
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 2 frame(s).
2: Starting the main time stepping loop...
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 2 frame(s).
2: Starting the main time stepping loop...
1: 70% completed
2: 10% completed
2: 20% completed
2: 30% completed
2: 40% completed
2: Performing data assimilation at time 0.0211...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
1: 80% completed
2: 10% completed
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
2: 50% completed
2: 20% completed
1: 90% completed
2: 60% completed
2: Performing data assimilation at time 0.0316...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: 30% completed
2: Updating the ensemble members...
2: Done.
2: 70% completed
1: 100% completed
2: 80% completed
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 2 frame(s).
1: Starting the main time stepping loop...
2: 40% completed
2: 90% completed
2: Performing data assimilation at time 0.0211...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: 100% completed
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 137699657us
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
1: 10% completed
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(225): Leaving test case "project_ray_data_on_mesh"; testing time: 101582012us
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(302): Entering test case "project_ray_data_on_nonaligned_mesh"
10: 
10: *** No errors detected
10: /var/jenkins/workspace/adamantine-nightly/tests/test_experimental_data.cc(302): Leaving test case "project_ray_data_on_nonaligned_mesh"; testing time: 160239us
10: Leaving test module "ExperimentaData"; testing time: 102243525us
10: 
 3/48 Test #10: test_experimental_data_1 .................   Passed  105.41 sec
test 11
      Start 11: test_geometry_1

11: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_geometry"
11: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
11: Test timeout computed to be: 7200
2: Updating the ensemble members...
2: Done.
11: Running 6 test cases...
11: Entering test module "Geometry"
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(61): Entering test case "geometry_2D"
1: 20% completed
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(61): Leaving test case "geometry_2D"; testing time: 51786us
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(86): Entering test case "geometry_3D"
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(86): Leaving test case "geometry_3D"; testing time: 92385us
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(113): Entering test case "geometry_shifted_origin"
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(113): Leaving test case "geometry_shifted_origin"; testing time: 115035us
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(148): Entering test case "gmsh"
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(148): Leaving test case "gmsh"; testing time: 356594us
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(171): Entering test case "read_stl"
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(171): Leaving test case "read_stl"; testing time: 122514us
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(232): Entering test case "geometry_stl_mesh"
11: 
11: *** No errors detected
11: /var/jenkins/workspace/adamantine-nightly/tests/test_geometry.cc(232): Leaving test case "geometry_stl_mesh"; testing time: 87859us
11: Leaving test module "Geometry"; testing time: 826826us
11: 
 4/48 Test #11: test_geometry_1 ..........................   Passed    5.54 sec
test 12
      Start 12: test_heat_source_1

12: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_heat_source"
12: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
12: Test timeout computed to be: 7200
12: Running 6 test cases...
12: Entering test module "HeatSource"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(104): Entering test case "gaussian_heat_source_value_2d"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(104): Leaving test case "gaussian_heat_source_value_2d"; testing time: 12309us
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(109): Entering test case "gaussian_heat_source_value_3d"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(109): Leaving test case "gaussian_heat_source_value_3d"; testing time: 251us
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(114): Entering test case "heat_source_value_2d"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(114): Leaving test case "heat_source_value_2d"; testing time: 277us
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(190): Entering test case "heat_source_vectorized_value_2d"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(190): Leaving test case "heat_source_vectorized_value_2d"; testing time: 275us
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(315): Entering test case "heat_source_value_3d"
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(315): Leaving test case "heat_source_value_3d"; testing time: 281us
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(381): Entering test case "heat_source_vectorized_value_3d"
12: 
12: *** No errors detected
12: /var/jenkins/workspace/adamantine-nightly/tests/test_heat_source.cc(381): Leaving test case "heat_source_vectorized_value_3d"; testing time: 278us
12: Leaving test module "HeatSource"; testing time: 14946us
12: 
 5/48 Test #12: test_heat_source_1 .......................   Passed    3.06 sec
test 13
      Start 13: test_integration_3d_device_1

13: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_device"
13: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
13: Test timeout computed to be: 7200
2: 50% completed
1: 30% completed
13: Running 2 test cases...
13: Entering test module "Integration_3D_Device"
13: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_device.cc(19): Entering test case "integration_3D_device"
1: 40% completed
2: 60% completed
1: Performing data assimilation at time 0.0211...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Performing data assimilation at time 0.0316...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
1: Updating the ensemble members...
1: Done.
2: Updating the ensemble members...
2: Done.
1: 50% completed
2: 70% completed
1: 60% completed
2: 80% completed
1: Performing data assimilation at time 0.0316...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
2: 90% completed
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
1: Updating the ensemble members...
1: Done.
2: 100% completed
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 222677463us
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: Starting the main time stepping loop...
2: Rank: 1 | Old parameters for member 2: 
2: Rank: 1 | Number expt sites mapped to DOFs: 1
2: 10% completed
2: 20% completed
2: 30% completed
2: 40% completed
1: 70% completed
2: 50% completed
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
2: 60% completed
2: 70% completed
2: 80% completed
2: 90% completed
2: 100% completed
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: Starting the main time stepping loop...
2: 10% completed
2: 20% completed
2: 30% completed
2: 40% completed
2: 50% completed
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
2: 60% completed
2: 70% completed
2: 80% completed
2: 90% completed
2: 100% completed
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 95373911us
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: Starting the main time stepping loop...
1: 80% completed
2: 10% completed
2: 20% completed
2: 30% completed
2: 40% completed
2: 50% completed
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
2: 60% completed
2: 70% completed
2: 80% completed
2: 90% completed
1: 90% completed
2: 100% completed
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 20751510us
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: Starting the main time stepping loop...
2: Rank: 1 | Old parameters for member 2: 
2: Rank: 1 | Number expt sites mapped to DOFs: 1
2: 10% completed
2: 20% completed
2: 30% completed
2: 40% completed
2: 50% completed
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
2: Updating the ensemble members...
2: Done.
2: 60% completed
2: 70% completed
2: 80% completed
2: 90% completed
1: 100% completed
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(78): Leaving test case "integration_data_assimilation"; testing time: 251457005us
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Entering test case "integration_3D_da_point_cloud_add_material"
2: 100% completed
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: Starting the main time stepping loop...
2: 10% completed
2: 20% completed
2: 30% completed
2: 40% completed
2: 50% completed
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
1: Starting the main time stepping loop...
2: Updating the ensemble members...
2: Done.
2: 60% completed
2: Reading the experimental log file...
2: Done. Log entries found for 1 camera(s), with 1 frame(s).
2: 70% completed
2: 80% completed
2: 90% completed
2: Starting the main time stepping loop...
2: 100% completed
2: 
2: *** No errors detected
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 20718401us
2: Leaving test module "Integration_Data_Assimilation"; testing time: 253792110us
1: 10% completed
1: 20% completed
2: 10% completed
1: 30% completed
2: 20% completed
1: 40% completed
2: 30% completed
1: 50% completed
2: 40% completed
1: Performing data assimilation at time 0.12...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
2: 50% completed
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
2: Performing data assimilation at time 0.12...
2: Rank: 0 | Old parameters for member 0: 
2: Rank: 0 | Old parameters for member 1: 
2: Rank: 0 | Old parameters for member 2: 
2: Rank: 0 | Number expt sites mapped to DOFs: 1
1: Updating the ensemble members...
1: Done.
1: 60% completed
2: Getting the perturbed innovation...
2: Applying the Kalman gain...
1: 70% completed
2: Updating the ensemble members...
2: Done.
2: 60% completed
1: 80% completed
2: 70% completed
1: 90% completed
2: 80% completed
2: 90% completed
1: 100% completed
2: 100% completed
2: 
2: *** No errors detected
2: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 17354555us
2: Leaving test module "Integration_Data_Assimilation"; testing time: 260783652us
2: 
 6/48 Test  #2: test_integration_da_2 ....................   Passed  264.88 sec
test 6
      Start  6: test_closest_source_point_adaptation_2

6: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_closest_source_point_adaptation"
6: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
6: Test timeout computed to be: 7200
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 1 frame(s).
1: Starting the main time stepping loop...
6: Running 1 test case...
6: Entering test module "ClosestSourcePointAdaptation"
6: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
6: Running 1 test case...
6: Entering test module "ClosestSourcePointAdaptation"
6: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Entering test case "closest_source_point_adaptation"
1: 10% completed
1: 20% completed
1: 30% completed
1: 40% completed
1: 50% completed
1: Performing data assimilation at time 0.12...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
1: Updating the ensemble members...
1: Done.
1: 60% completed
1: 70% completed
1: 80% completed
1: 90% completed
1: 100% completed
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(148): Leaving test case "integration_3D_da_point_cloud_add_material"; testing time: 20633074us
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Entering test case "integration_3D_da_ray_add_material"
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 1 frame(s).
1: Starting the main time stepping loop...
1: 10% completed
1: 20% completed
1: 30% completed
1: 40% completed
1: 50% completed
1: Performing data assimilation at time 0.12...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
1: Updating the ensemble members...
1: Done.
1: 60% completed
13: 10% completed
1: 70% completed
1: 80% completed
1: 90% completed
6: 
6: *** No errors detected
6: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 18932556us
6: Leaving test module "ClosestSourcePointAdaptation"; testing time: 18932605us
6: 
6: *** No errors detected
6: /var/jenkins/workspace/adamantine-nightly/tests/test_closest_source_point_adaptation.cc(123): Leaving test case "closest_source_point_adaptation"; testing time: 18751458us
6: Leaving test module "ClosestSourcePointAdaptation"; testing time: 18751498us
6: 
 7/48 Test  #6: test_closest_source_point_adaptation_2 ...   Passed   21.33 sec
test 14
      Start 14: test_material_property_1

14: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_material_property"
14: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
14: Test timeout computed to be: 7200
test 15
      Start 15: test_material_property_device_1

15: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_material_property_device"
15: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
15: Test timeout computed to be: 7200
1: 100% completed
14: Running 4 test cases...
14: Entering test module "MaterialProperty"
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(13): Entering test case "material_property_host"
15: Running 4 test cases...
15: Entering test module "MaterialPropertyDevice"
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(13): Entering test case "material_property_device"
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(13): Leaving test case "material_property_host"; testing time: 181992us
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(18): Entering test case "ratios_host"
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(13): Leaving test case "material_property_device"; testing time: 153855us
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(18): Entering test case "ratios_device"
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(18): Leaving test case "ratios_host"; testing time: 136059us
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(20): Entering test case "material_property_table_host"
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(18): Leaving test case "ratios_device"; testing time: 133877us
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(20): Entering test case "material_property_table_device"
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(20): Leaving test case "material_property_table_host"; testing time: 150756us
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(25): Entering test case "material_property_polynomials_host"
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(20): Leaving test case "material_property_table_device"; testing time: 137239us
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(25): Entering test case "material_property_polynomials_device"
14: 
14: *** No errors detected
14: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property.cc(25): Leaving test case "material_property_polynomials_host"; testing time: 128530us
14: Leaving test module "MaterialProperty"; testing time: 597520us
15: 
15: *** No errors detected
15: /var/jenkins/workspace/adamantine-nightly/tests/test_material_property_device.cc(25): Leaving test case "material_property_polynomials_device"; testing time: 127787us
15: Leaving test module "MaterialPropertyDevice"; testing time: 552928us
14: 
 8/48 Test #14: test_material_property_1 .................   Passed    3.27 sec
test 16
      Start 16: test_mechanical_operator_1

16: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_mechanical_operator"
16: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
16: Test timeout computed to be: 7200
15: 
 9/48 Test #15: test_material_property_device_1 ..........   Passed    3.29 sec
test 17
      Start 17: test_mechanical_physics_1

17: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_mechanical_physics"
17: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
17: Test timeout computed to be: 7200
1: Reading the experimental log file...
1: Done. Log entries found for 1 camera(s), with 1 frame(s).
1: Starting the main time stepping loop...
17: Running 7 test cases...
17: Entering test module "MechanicalPhysics"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(197): Entering test case "elastostatic"
16: Running 2 test cases...
16: Entering test module "MechanicalOperator"
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(71): Entering test case "elastostatic"
1: 10% completed
1: 20% completed
1: 30% completed
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(197): Leaving test case "elastostatic"; testing time: 2444224us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(267): Entering test case "fe_nothing"
1: 40% completed
1: 50% completed
1: Performing data assimilation at time 0.12...
1: Rank: 0 | Old parameters for member 0: 
1: Rank: 0 | Old parameters for member 1: 
1: Rank: 0 | Old parameters for member 2: 
1: Rank: 0 | Number expt sites mapped to DOFs: 1
1: Getting the perturbed innovation...
1: Applying the Kalman gain...
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(267): Leaving test case "fe_nothing"; testing time: 2625516us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(534): Entering test case "thermoelastic_eshelby"
1: Updating the ensemble members...
1: Done.
1: 60% completed
1: 70% completed
1: 80% completed
1: 90% completed
1: 100% completed
1: 
1: *** No errors detected
1: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da.cc(231): Leaving test case "integration_3D_da_ray_add_material"; testing time: 27542945us
1: Leaving test module "Integration_Data_Assimilation"; testing time: 299633147us
1: 
10/48 Test  #1: test_integration_da_1 ....................   Passed  303.90 sec
test 18
      Start 18: test_post_processor_1

18: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_post_processor"
18: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
18: Test timeout computed to be: 7200
18: Running 2 test cases...
18: Entering test module "PostProcessor"
18: /var/jenkins/workspace/adamantine-nightly/tests/test_post_processor.cc(27): Entering test case "thermal_post_processor"
18: /var/jenkins/workspace/adamantine-nightly/tests/test_post_processor.cc(27): Leaving test case "thermal_post_processor"; testing time: 1330481us
18: /var/jenkins/workspace/adamantine-nightly/tests/test_post_processor.cc(149): Entering test case "mechanical_post_processor"
18: 
18: *** No errors detected
18: /var/jenkins/workspace/adamantine-nightly/tests/test_post_processor.cc(149): Leaving test case "mechanical_post_processor"; testing time: 20624318us
18: Leaving test module "PostProcessor"; testing time: 21954868us
18: 
11/48 Test #18: test_post_processor_1 ....................   Passed   26.40 sec
test 19
      Start 19: test_quaternion_1

19: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_quaternion"
19: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
19: Test timeout computed to be: 7200
19: Running 1 test case...
19: Entering test module "Quaternion"
19: /var/jenkins/workspace/adamantine-nightly/tests/test_quaternion.cc(11): Entering test case "rotation"
19: 
19: *** No errors detected
19: /var/jenkins/workspace/adamantine-nightly/tests/test_quaternion.cc(11): Leaving test case "rotation"; testing time: 152us
19: Leaving test module "Quaternion"; testing time: 178us
19: 
12/48 Test #19: test_quaternion_1 ........................   Passed    3.73 sec
test 20
      Start 20: test_scan_path_1

20: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_scan_path"
20: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
20: Test timeout computed to be: 7200
20: Running 3 test cases...
20: Entering test module "ScanPath"
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(36): Entering test case "scan_path"
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(36): Leaving test case "scan_path"; testing time: 23481us
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(78): Entering test case "scan_path_location"
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(78): Leaving test case "scan_path_location"; testing time: 164us
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(106): Entering test case "five_axis"
20: /var/jenkins/workspace/adamantine-nightly/tests/test_scan_path.cc(106): Leaving test case "five_axis"; testing time: 41461us
20: Leaving test module "ScanPath"; testing time: 65790us
20: 
20: *** No errors detected
20: 
13/48 Test #20: test_scan_path_1 .........................   Passed    4.34 sec
test 21
      Start 21: test_thermal_operator_1

21: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_operator"
21: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
21: Test timeout computed to be: 7200
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(71): Leaving test case "elastostatic"; testing time: 51903663us
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(303): Entering test case "thermoelastic"
21: Running 6 test cases...
21: Entering test module "ThermalOperator"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(41): Entering test case "thermal_operator"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(41): Leaving test case "thermal_operator"; testing time: 606988us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(148): Entering test case "spmv"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(148): Leaving test case "spmv"; testing time: 991678us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(265): Entering test case "spmv_anisotropic"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(265): Leaving test case "spmv_anisotropic"; testing time: 973035us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(415): Entering test case "spmv_anisotropic_angle"
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(415): Leaving test case "spmv_anisotropic_angle"; testing time: 3002389us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(580): Entering test case "spmv_rad"
16: 
16: *** No errors detected
16: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_operator.cc(303): Leaving test case "thermoelastic"; testing time: 14288627us
16: Leaving test module "MechanicalOperator"; testing time: 66192886us
16: 
14/48 Test #16: test_mechanical_operator_1 ...............   Passed   68.98 sec
test 22
      Start 22: test_thermal_operator_device_1

22: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_operator_device"
22: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
22: Test timeout computed to be: 7200
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(580): Leaving test case "spmv_rad"; testing time: 9888056us
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(772): Entering test case "spmv_conv"
22: Running 4 test cases...
22: Entering test module "ThermalOperatorDevice"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(31): Entering test case "thermal_operator_dev"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(31): Leaving test case "thermal_operator_dev"; testing time: 405281us
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(124): Entering test case "spmv"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(124): Leaving test case "spmv"; testing time: 413222us
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(237): Entering test case "mf_spmv"
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(237): Leaving test case "mf_spmv"; testing time: 3248498us
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(375): Entering test case "spmv_anisotropic_angle"
22: 
22: *** No errors detected
22: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator_device.cc(375): Leaving test case "spmv_anisotropic_angle"; testing time: 1166824us
22: Leaving test module "ThermalOperatorDevice"; testing time: 5235149us
22: 
15/48 Test #22: test_thermal_operator_device_1 ...........   Passed    8.11 sec
test 23
      Start 23: test_thermal_physics_device_1

23: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_physics_device"
23: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
23: Test timeout computed to be: 7200
21: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_operator.cc(772): Leaving test case "spmv_conv"; testing time: 9185571us
21: Leaving test module "ThermalOperator"; testing time: 24649601us
21: 
21: *** No errors detected
23: Running 4 test cases...
23: Entering test module "ThermalPhysicsDevice"
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(13): Entering test case "thermal_2d_explicit_device"
21: 
16/48 Test #21: test_thermal_operator_1 ..................   Passed   31.51 sec
test 24
      Start 24: test_timer_1

24: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_timer"
24: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
24: Test timeout computed to be: 7200
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(13): Leaving test case "thermal_2d_explicit_device"; testing time: 581773us
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(26): Entering test case "thermal_2d_manufactured_solution_device"
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(26): Leaving test case "thermal_2d_manufactured_solution_device"; testing time: 516194us
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(31): Entering test case "initial_temperature_device"
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(31): Leaving test case "initial_temperature_device"; testing time: 249524us
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(36): Entering test case "energy_conservation_device"
24: Running 1 test case...
24: Entering test module "Timer"
24: /var/jenkins/workspace/adamantine-nightly/tests/test_timer.cc(15): Entering test case "test_timer"
24: 
24: *** No errors detected
24: /var/jenkins/workspace/adamantine-nightly/tests/test_timer.cc(15): Leaving test case "test_timer"; testing time: 610140us
24: Leaving test module "Timer"; testing time: 610184us
24: 
17/48 Test #24: test_timer_1 .............................   Passed    3.02 sec
test 25
      Start 25: test_utils_1

25: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_utils"
25: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
25: Test timeout computed to be: 7200
25: Running 1 test case...
25: Entering test module "utils"
25: /var/jenkins/workspace/adamantine-nightly/tests/test_utils.cc(11): Entering test case "utils"
25: 
25: *** No errors detected
25: /var/jenkins/workspace/adamantine-nightly/tests/test_utils.cc(11): Leaving test case "utils"; testing time: 208us
25: Leaving test module "utils"; testing time: 235us
25: 
18/48 Test #25: test_utils_1 .............................   Passed    2.93 sec
test 26
      Start 26: test_validate_input_database_1

26: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_validate_input_database"
26: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
26: Test timeout computed to be: 7200
26: Running 3 test cases...
26: Entering test module "validate_input_database"
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(14): Entering test case "expected_passes"
26: Test case expected_passes did not check any assertions
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(14): Leaving test case "expected_passes"; testing time: 702us
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(55): Entering test case "parse_test_input_files"
26: Test case parse_test_input_files did not check any assertions
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(55): Leaving test case "parse_test_input_files"; testing time: 91987us
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(76): Entering test case "expected_failures"
26: 
26: *** No errors detected
26: /var/jenkins/workspace/adamantine-nightly/tests/test_validate_input_database.cc(76): Leaving test case "expected_failures"; testing time: 6914us
26: Leaving test module "validate_input_database"; testing time: 99690us
26: 
19/48 Test #26: test_validate_input_database_1 ...........   Passed    2.96 sec
test 27
      Start 27: test_integration_2d_1

27: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_2d"
27: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
27: Test timeout computed to be: 7200
27: Running 3 test cases...
27: Entering test module "Integration_2D"
27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Entering test case "integration_2D"
27: 10% completed
27: 20% completed
27: 30% completed
27: 40% completed
27: 50% completed
27: 60% completed
27: 70% completed
27: 80% completed
27: 90% completed
27: 100% completed
27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Leaving test case "integration_2D"; testing time: 9333497us
27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Entering test case "integration_2D_ensemble"
27: Starting the main time stepping loop...
27: 10% completed
27: 20% completed
27: 30% completed
27: 40% completed
27: 50% completed
27: 60% completed
27: 70% completed
27: 80% completed
27: 90% completed
27: 100% completed
27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Leaving test case "integration_2D_ensemble"; testing time: 28662470us
27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Entering test case "integration_2D_units"
27: 10% completed
27: 20% completed
27: 30% completed
27: 40% completed
27: 50% completed
27: 60% completed
27: 70% completed
27: 80% completed
27: 90% completed
27: 100% completed
27: 
27: *** No errors detected
27: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Leaving test case "integration_2D_units"; testing time: 9750066us
27: Leaving test module "Integration_2D"; testing time: 47747457us
13: 20% completed
27: 
20/48 Test #27: test_integration_2d_1 ....................   Passed   52.56 sec
test 29
      Start 29: test_integration_2d_device_1

29: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_2d_device"
29: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
29: Test timeout computed to be: 7200
29: Running 1 test case...
29: Entering test module "Integration_2D_Device"
29: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Entering test case "intregation_2D_device"
29: 10% completed
29: 20% completed
29: 30% completed
29: 40% completed
29: 50% completed
29: 60% completed
29: 70% completed
29: 80% completed
29: 90% completed
29: 100% completed
29: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Leaving test case "intregation_2D_device"; testing time: 13260904us
29: Leaving test module "Integration_2D_Device"; testing time: 13261274us
29: 
29: *** No errors detected
29: 
21/48 Test #29: test_integration_2d_device_1 .............   Passed   18.52 sec
test 31
      Start 31: test_integration_3d_1

31: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d"
31: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
31: Test timeout computed to be: 7200
31: Running 5 test cases...
31: Entering test module "Integration_3D"
31: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Entering test case "integration_3D"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(534): Leaving test case "thermoelastic_eshelby"; testing time: 198468231us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(562): Entering test case "elastoplastic_radial_return"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(562): Leaving test case "elastoplastic_radial_return"; testing time: 826495us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(668): Entering test case "cell_data_transfer_refine_coarsen"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(668): Leaving test case "cell_data_transfer_refine_coarsen"; testing time: 4371009us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(777): Entering test case "thermoelastic_stress_uniform_heating"
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(777): Leaving test case "thermoelastic_stress_uniform_heating"; testing time: 1086217us
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(866): Entering test case "thermoelastoplastic_radial_return"
17: 
17: *** No errors detected
17: /var/jenkins/workspace/adamantine-nightly/tests/test_mechanical_physics.cc(866): Leaving test case "thermoelastoplastic_radial_return"; testing time: 1330ms
17: Leaving test module "MechanicalPhysics"; testing time: 211152411us
17: 
22/48 Test #17: test_mechanical_physics_1 ................   Passed  213.80 sec
test 33
      Start 33: test_integration_3d_amr_1

33: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_amr"
33: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
33: Test timeout computed to be: 7200
33: Running 2 test cases...
33: Entering test module "Integration_3D_AMR"
33: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Entering test case "integration_3D_amr"
33: 10% completed
33: 20% completed
33: 30% completed
33: 40% completed
33: 50% completed
33: 60% completed
23: 
23: *** No errors detected
23: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics_device.cc(36): Leaving test case "energy_conservation_device"; testing time: 165943071us
23: Leaving test module "ThermalPhysicsDevice"; testing time: 167290756us
23: 
23/48 Test #23: test_thermal_physics_device_1 ............   Passed  170.81 sec
test 35
      Start 35: test_integration_3d_amr_device_1

35: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d_amr_device"
35: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
35: Test timeout computed to be: 7200
33: 70% completed
35: Running 1 test case...
35: Entering test module "Integration_3D_AMR"
35: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Entering test case "integration_3D_amr_device"
33: 80% completed
33: 90% completed
33: 100% completed
33: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(19): Leaving test case "integration_3D_amr"; testing time: 44664854us
33: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Entering test case "integration_3D_amr_refine_coarsen"
31: 10% completed
35: 10% completed
13: 30% completed
33: 10% completed
35: 20% completed
31: 20% completed
35: 30% completed
31: 30% completed
33: 20% completed
31: 40% completed
35: 40% completed
33: 30% completed
13: 40% completed
35: 50% completed
31: 50% completed
33: 40% completed
31: 60% completed
35: 60% completed
31: 70% completed
35: 70% completed
33: 50% completed
35: 80% completed
31: 80% completed
31: 90% completed
33: 60% completed
35: 90% completed
33: 70% completed
13: 50% completed
31: 100% completed
31: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Leaving test case "integration_3D"; testing time: 519809349us
31: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Entering test case "integration_3D_short"
33: 80% completed
33: 90% completed
35: 100% completed
35: 
35: *** No errors detected
35: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr_device.cc(19): Leaving test case "integration_3D_amr_device"; testing time: 465524614us
35: Leaving test module "Integration_3D_AMR"; testing time: 465524988us
35: 
24/48 Test #35: test_integration_3d_amr_device_1 .........   Passed  470.23 sec
test 37
      Start 37: test_integration_da_augmented_1

37: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_da_augmented"
37: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
37: Test timeout computed to be: 7200
37: Running 1 test case...
37: Entering test module "Integration_Data_Assimilation_Augmented"
37: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Entering test case "integration_3D_data_assimilation_augmented"
33: 100% completed
33: 
33: *** No errors detected
33: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_amr.cc(60): Leaving test case "integration_3D_amr_refine_coarsen"; testing time: 464378768us
33: Leaving test module "Integration_3D_AMR"; testing time: 509044329us
37: Reading the experimental log file...
37: Done. Log entries found for 1 camera(s), with 2 frame(s).
33: 
25/48 Test #33: test_integration_3d_amr_1 ................   Passed  512.76 sec
test 39
      Start 39: test_integration_thermoelastic_1

39: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_thermoelastic"
39: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
39: Test timeout computed to be: 7200
37: Starting the main time stepping loop...
39: Running 2 test cases...
39: Entering test module "Integration_Thermoelastic"
39: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_thermoelastic.cc(19): Entering test case "integration_thermoelastic"
37: 10% completed
37: 20% completed
37: 30% completed
37: 40% completed
37: 50% completed
37: 60% completed
13: 60% completed
37: 70% completed
37: Performing data assimilation at time 0.04...
37: Rank: 0 | Old parameters for member 0: 0.413453 
37: Rank: 0 | Old parameters for member 1: 0.385362 
37: Rank: 0 | Old parameters for member 2: 0.446065 
37: Rank: 0 | Number expt sites mapped to DOFs: 2
37: Getting the perturbed innovation...
37: Applying the Kalman gain...
37: Updating the ensemble members...
37: Done.
37: Rank: 0 | New parameters for member 0: 0.121104 
37: Rank: 0 | New parameters for member 1: 0.142225 
37: Rank: 0 | New parameters for member 2: 0.107206 
37: 80% completed
37: 90% completed
37: 100% completed
37: 
37: *** No errors detected
37: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_da_augmented.cc(19): Leaving test case "integration_3D_data_assimilation_augmented"; testing time: 222386610us
37: Leaving test module "Integration_Data_Assimilation_Augmented"; testing time: 222387548us
37: 
26/48 Test #37: test_integration_da_augmented_1 ..........   Passed  226.17 sec
test 41
      Start 41: test_material_deposition_1

41: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_material_deposition"
41: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
41: Test timeout computed to be: 7200
41: Running 11 test cases...
41: Entering test module "MaterialDeposition"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Entering test case "read_material_deposition_file_2d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(50): Leaving test case "read_material_deposition_file_2d"; testing time: 34240us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Entering test case "read_material_deposition_file_3d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(92): Leaving test case "read_material_deposition_file_3d"; testing time: 33670us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(134): Entering test case "get_elements_to_activate_2d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(134): Leaving test case "get_elements_to_activate_2d"; testing time: 242149us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(195): Entering test case "get_elements_to_activate_3d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(195): Leaving test case "get_elements_to_activate_3d"; testing time: 743457us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Entering test case "material_deposition"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(262): Leaving test case "material_deposition"; testing time: 45344342us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Entering test case "deposition_from_scan_path_2d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(395): Leaving test case "deposition_from_scan_path_2d"; testing time: 96302us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Entering test case "deposition_from_scan_path_3d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(445): Leaving test case "deposition_from_scan_path_3d"; testing time: 248us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Entering test case "deposition_from_L_scan_path_3d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(499): Leaving test case "deposition_from_L_scan_path_3d"; testing time: 33531us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Entering test case "deposition_from_diagonal_scan_path_3d"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(586): Leaving test case "deposition_from_diagonal_scan_path_3d"; testing time: 43743us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Entering test case "merge_multiple_deposition_paths"
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(640): Leaving test case "merge_multiple_deposition_paths"; testing time: 153us
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Entering test case "deposition_quaternion_straight_line"
41: 
41: *** No errors detected
41: /var/jenkins/workspace/adamantine-nightly/tests/test_material_deposition.cc(697): Leaving test case "deposition_quaternion_straight_line"; testing time: 33896us
41: Leaving test module "MaterialDeposition"; testing time: 46607849us
41: 
27/48 Test #41: test_material_deposition_1 ...............   Passed   53.10 sec
test 43
      Start 43: test_microstructure_1

43: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_microstructure"
43: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
43: Test timeout computed to be: 7200
43: Running 1 test case...
43: Entering test module "MicroStructure"
43: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Entering test case "G_and_R"
43: 
43: *** No errors detected
43: /var/jenkins/workspace/adamantine-nightly/tests/test_microstructure.cc(53): Leaving test case "G_and_R"; testing time: 929206us
43: Leaving test module "MicroStructure"; testing time: 929269us
43: 
28/48 Test #43: test_microstructure_1 ....................   Passed    3.86 sec
test 45
      Start 45: test_thermal_physics_1

45: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_thermal_physics"
45: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
45: Test timeout computed to be: 7200
45: Running 7 test cases...
45: Entering test module "ThermalPhysics"
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Entering test case "thermal_2d_explicit_host"
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(15): Leaving test case "thermal_2d_explicit_host"; testing time: 671221us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Entering test case "thermal_2d_manufactured_solution_host"
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(28): Leaving test case "thermal_2d_manufactured_solution_host"; testing time: 625167us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Entering test case "initial_temperature_host"
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(33): Leaving test case "initial_temperature_host"; testing time: 576430us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Entering test case "energy_conservation_host"
13: 70% completed
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(38): Leaving test case "energy_conservation_host"; testing time: 19614306us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Entering test case "radiation_bcs_host"
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(43): Leaving test case "radiation_bcs_host"; testing time: 30809528us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Entering test case "convection_bcs_host"
13: 80% completed
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(48): Leaving test case "convection_bcs_host"; testing time: 238302520us
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Entering test case "reference_temperature_host"
45: 
45: *** No errors detected
45: /var/jenkins/workspace/adamantine-nightly/tests/test_thermal_physics.cc(53): Leaving test case "reference_temperature_host"; testing time: 695319us
45: Leaving test module "ThermalPhysics"; testing time: 291295788us
45: 
29/48 Test #45: test_thermal_physics_1 ...................   Passed  296.26 sec
test 47
      Start 47: test_ensemble_management_1

47: Test command: /usr/bin/mpiexec "-n" "1" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_ensemble_management"
47: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
47: Test timeout computed to be: 7200
47: Running 1 test case...
47: Entering test module "EnsembleManagement"
47: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Entering test case "database_ensemble"
47: 
47: *** No errors detected
47: /var/jenkins/workspace/adamantine-nightly/tests/test_ensemble_management.cc(17): Leaving test case "database_ensemble"; testing time: 228014us
47: Leaving test module "EnsembleManagement"; testing time: 228064us
47: 
30/48 Test #47: test_ensemble_management_1 ...............   Passed    4.78 sec
13: 90% completed
13: 100% completed
13: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_device.cc(19): Leaving test case "integration_3D_device"; testing time: 1633340443us
13: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_device.cc(46): Entering test case "integration_3D_checkpoint_restart_device"
13: 10% completed
13: 20% completed
13: 30% completed
13: 40% completed
13: 50% completed
13: 60% completed
13: 70% completed
31: 10% completed
13: Checkpoint reached
13: 80% completed
13: 90% completed
13: 100% completed
13: Restarting from file
13: 80% completed
13: 90% completed
13: 100% completed
13: 
13: *** No errors detected
13: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d_device.cc(46): Leaving test case "integration_3D_checkpoint_restart_device"; testing time: 466484128us
13: Leaving test module "Integration_3D_Device"; testing time: 2099825489us
13: 
31/48 Test #13: test_integration_3d_device_1 .............   Passed  2105.09 sec
test 28
      Start 28: test_integration_2d_2

28: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_2d"
28: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
28: Test timeout computed to be: 7200
28: Running 3 test cases...
28: Entering test module "Integration_2D"
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Entering test case "integration_2D"
28: Running 3 test cases...
28: Entering test module "Integration_2D"
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Entering test case "integration_2D"
28: 10% completed
28: 20% completed
28: 30% completed
28: 40% completed
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28: 90% completed
28: 100% completed
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Leaving test case "integration_2D"; testing time: 6893335us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Entering test case "integration_2D_ensemble"
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(19): Leaving test case "integration_2D"; testing time: 6545977us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Entering test case "integration_2D_ensemble"
28: Starting the main time stepping loop...
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Leaving test case "integration_2D_ensemble"; testing time: 3149913us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Entering test case "integration_2D_units"
28: 10% completed
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28: 40% completed
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28: 80% completed
28: 90% completed
28: 100% completed
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(46): Leaving test case "integration_2D_ensemble"; testing time: 15664177us
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Entering test case "integration_2D_units"
28: 10% completed
28: 20% completed
28: 30% completed
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28: 80% completed
28: 90% completed
28: 100% completed
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Leaving test case "integration_2D_units"; testing time: 18928022us
28: Leaving test module "Integration_2D"; testing time: 28972276us
28: 
28: *** No errors detected
28: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d.cc(78): Leaving test case "integration_2D_units"; testing time: 6403338us
28: Leaving test module "Integration_2D"; testing time: 28614443us
28: 
28: *** No errors detected
28: 
32/48 Test #28: test_integration_2d_2 ....................   Passed   33.20 sec
test 30
      Start 30: test_integration_2d_device_2

30: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_2d_device"
30: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
30: Test timeout computed to be: 7200
30: Running 1 test case...
30: Entering test module "Integration_2D_Device"
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Entering test case "intregation_2D_device"
30: Running 1 test case...
30: Entering test module "Integration_2D_Device"
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Entering test case "intregation_2D_device"
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30: 100% completed
30: 
30: *** No errors detected
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Leaving test case "intregation_2D_device"; testing time: 8324549us
30: Leaving test module "Integration_2D_Device"; testing time: 8325382us
30: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_2d_device.cc(19): Leaving test case "intregation_2D_device"; testing time: 7965113us
30: Leaving test module "Integration_2D_Device"; testing time: 7965964us
30: 
30: *** No errors detected
30: 
33/48 Test #30: test_integration_2d_device_2 .............   Passed   12.82 sec
test 32
      Start 32: test_integration_3d_2

32: Test command: /usr/bin/mpiexec "-n" "2" "/var/jenkins/workspace/adamantine-nightly/build/bin/test_integration_3d"
32: Working Directory: /var/jenkins/workspace/adamantine-nightly/build/tests
32: Test timeout computed to be: 7200
32: Running 5 test cases...
32: Entering test module "Integration_3D"
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Entering test case "integration_3D"
32: Running 5 test cases...
32: Entering test module "Integration_3D"
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Entering test case "integration_3D"
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32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Leaving test case "integration_3D"; testing time: 224490898us
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Entering test case "integration_3D_short"
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(102): Leaving test case "integration_3D"; testing time: 224211381us
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Entering test case "integration_3D_short"
31: 30% completed
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32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Leaving test case "integration_3D_short"; testing time: 1974959012us
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Entering test case "integration_3D_five_axis"
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Leaving test case "integration_3D_short"; testing time: 1975249747us
32: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Entering test case "integration_3D_five_axis"
31: 70% completed
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31: 100% completed
31: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(107): Leaving test case "integration_3D_short"; testing time: 3861512997us
31: /var/jenkins/workspace/adamantine-nightly/tests/test_integration_3d.cc(112): Entering test case "integration_3D_five_axis"
32: 10% completed
39: 30% completed
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waffle_02 is back online
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waffle_02 is back online
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waffle_02 is back online
waffle_02 seems to be removed or offline (hudson.remoting.ChannelClosedException: Channel "hudson.remoting.Channel@7d5fcc27:JNLP4-connect connection from 10.64.193.248/10.64.193.248:44598": Remote call on JNLP4-connect connection from 10.64.193.248/10.64.193.248:44598 failed. The channel is closing down or has closed down); will wait for 5 min 0 sec for it to come back online
waffle_02 is back online
waffle_02 seems to be removed or offline (hudson.remoting.ChannelClosedException: Channel "hudson.remoting.Channel@7d5fcc27:JNLP4-connect connection from 10.64.193.248/10.64.193.248:44598": Remote call on JNLP4-connect connection from 10.64.193.248/10.64.193.248:44598 failed. The channel is closing down or has closed down); will wait for 5 min 0 sec for it to come back online
waffle_02 is back online
waffle_02 seems to be removed or offline (hudson.remoting.ChannelClosedException: Channel "hudson.remoting.Channel@7d5fcc27:JNLP4-connect connection from 10.64.193.248/10.64.193.248:44598": Remote call on JNLP4-connect connection from 10.64.193.248/10.64.193.248:44598 failed. The channel is closing down or has closed down); will wait for 5 min 0 sec for it to come back online
waffle_02 is back online
waffle_02 seems to be removed or offline (hudson.remoting.ChannelClosedException: Channel "hudson.remoting.Channel@7d5fcc27:JNLP4-connect connection from 10.64.193.248/10.64.193.248:44598": Remote call on JNLP4-connect connection from 10.64.193.248/10.64.193.248:44598 failed. The channel is closing down or has closed down); will wait for 5 min 0 sec for it to come back online
waffle_02 is back online
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waffle_02 is back online
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waffle_02 is back online
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waffle_02 is back online
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waffle_02 is back online
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waffle_02 is back online
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waffle_02 is back online
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waffle_02 is back online
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waffle_02 is back online
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waffle_02 is back online
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waffle_02 is back online
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waffle_02 is back online
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waffle_02 is back online
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waffle_02 is back online
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waffle_02 is back online
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waffle_02 is back online
waffle_02 seems to be removed or offline (hudson.remoting.ChannelClosedException: Channel "hudson.remoting.Channel@7d5fcc27:JNLP4-connect connection from 10.64.193.248/10.64.193.248:44598": Remote call on JNLP4-connect connection from 10.64.193.248/10.64.193.248:44598 failed. The channel is closing down or has closed down); will wait for 5 min 0 sec for it to come back online
waffle_02 is back online
waffle_02 seems to be removed or offline (hudson.remoting.ChannelClosedException: Channel "hudson.remoting.Channel@7d5fcc27:JNLP4-connect connection from 10.64.193.248/10.64.193.248:44598": Remote call on JNLP4-connect connection from 10.64.193.248/10.64.193.248:44598 failed. The channel is closing down or has closed down); will wait for 5 min 0 sec for it to come back online
waffle_02 is back online
waffle_02 seems to be removed or offline (hudson.remoting.ChannelClosedException: Channel "hudson.remoting.Channel@7d5fcc27:JNLP4-connect connection from 10.64.193.248/10.64.193.248:44598": Remote call on JNLP4-connect connection from 10.64.193.248/10.64.193.248:44598 failed. The channel is closing down or has closed down); will wait for 5 min 0 sec for it to come back online
waffle_02 has been removed or offline for 5 min 0 sec; assuming it is not coming back, and terminating shell step
Terminating withEnv (id: 3)
Terminating timeout (id: 5)
Terminating stage (id: 7)
Terminating parallel (id: 9)
Terminating stage (id: 15)
Terminating node (id: 18)
Terminating withEnv (id: 33)
Terminating withEnv (id: 43)
Terminating dir (id: 46)
waffle_02 has been removed or offline for 5 min 0 sec; assuming it is not coming back, and terminating shell step
[Pipeline] End of Pipeline
waffle_02 has been removed or offline for 5 min 0 sec; assuming it is not coming back, and terminating shell step
waffle_02 has been removed or offline for 5 min 0 sec; assuming it is not coming back, and terminating shell step
java.lang.OutOfMemoryError: Java heap space
Finished: FAILURE